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FASTA Sequence PDB Format mmCIF Format
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9HYU

Cryo-em structure of the chromera velia psi supercomplex at 1.84 angstrom resolution

PDB DOI: 10.2210/pdb9hyu/pdb

Classification: PHOTOSYNTHESIS
Organism(s): Chromera Velia

Deposited: 2025-01-10
Deposition Author(s): Naschberger, A. , Qian, P. , Sobotka, R. , Yuan, X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 1.84 Å

9hyu
Literature

Cryo-em structure of the chromera velia psi supercomplex at 1.84 angstrom resolution

Naschberger, A. , Qian, P. , Sobotka, R. , Yuan, X.

Primary Citation of Related Structures: 9HYU


Proteins
Molecule Chains Sequence Length Organism Sequence
Superoxide dismutase [Fe] 1 370 Chromera Velia MRVHPVVAVSGLGVSAVSAFVFRGTPSAGIPRASPAATELSNYPERVAKEPGWAKVEYEIGGIGWSNPAIDEANENITKKMQANGETIFNLWAPWDQAQVRTQDAPSYRELMDVVDFTWQIPGTERWWYDLNIDDAVRMQPFPLERIRFDPRNLQPHRFPEQVFDHLAEYHAPYVRKLKALVEGTPLEKESLEELASRKTRNETIDNAVGMCYNTGLYWESLSSKSDWGGDQWAHGPLKEKIEKKYGSLKGFKDAVVTAGMALFGSGHLWIVSDKTGEVDIVTTSDASNPMREGKGYPLLVCDLWEHAFYEDFRNDKKKALTSWLNLMNWQKGNKRLETYMEKMKLKDLAPTPAQEMKPKEPEPTPGPAA
Photosystem I protein (PsaM) M 195 Chromera Velia MKFLSASLLGCFVTSSAFVLQAPRSLRPASPVRRLENPRPVETVTNAFDFSQIDTGVLNVSADPDLYQSIRLFTLIAVFAITLGSVARRFSPSINDYQVDQDYIELKRKNYFPSEDEFLDNRKDFESQTKKTTEMFEACKTWGAYAALRNSGAGKKKAQEFLGIKSDAELKAIENKAELMKWYGSYKSNERKVAW
Photosystem I protein (PsaR) R 202 Chromera Velia MPSIRLVATAVAVGMGVTSAFQQTPIRALKQRSEASTTLNDVKEMDLDSTWTYVKNRNIKPITEAKKLDILRTQILPVGTEQHAEAVHEILRNADLPMGVAQTNAVKRAPANVVLAGAVILFLIGFLGHWMNVINVPRGLPLLFGWPRVSWLAISSLMLPAYFLHLEGYNTIQRDAMYEELAKYGIKREDPFLEPPRELIKP
Photosystem I protein (PsaB) B 1139 Chromera Velia MWSLEQMRDEVYEFSKKGFRKTFNLVVSEPSHTAIMPKENSILTFRFTDGEEVPPSDGRLGEVSPHNGEEAKISRDHVQANLRIEQTRVGSRYVLSVSPLSNPTGDKDSHHHQFWLPEELVKKITFFRDKEDSVGITIAAIPPKDYLESRLYSKTESEVPSPDGQEGEVPPQAEAKFRIIKTTEGPYSVLKAYPPNQVNPGTFRLPSFLLGNRDFQVGLNEKNEPFLDMFLYTPILVIWGSLGGKLPPQEWEVGGWSWDYVPQVLWPNSRTRFVLTNEGPNQLTILVGSQQGPKSEPTTKDPKSDPDKKKDGPWFRKSKGKDITVTSELSTTQRLWNRLSQVNDFPSTMPEGNVIVQIFRSHLVQLALILFWAAGILTLSTYQGNFTQWELLPTKIRPVAHQIWDPHFGDALSRIYSDFWSNKTVGEGASSTWSSLNYLTCGLFNWWFTIGFRSTEDLLNAALGCFLGGIFLLVLQILGPVSPEWPTPVSQWTSKSVLSLGFSRELWGEIPGFDVKEDANDSDMEANLSPNWSLSVQGLIWTNQLFLGSFKLFNLSSAYLSFALIAPLFKYFINLYFLKDLLYFAGCGSLSWSGHLIHIAIPESRGIHVRGDNLLTTLPHPNGIVPLLTGDLQAYAQAPDSSTHVFGTPVGSGTAMLTFSGNIYQNTSQIFPLTDVAHHHLAIGVLFLIIDGTLRILNLGNLGLLFSSANRYSAFQMWNSNTGEFIQSIIYMFSSSLHFRLAVNLSVFSTLSSLTAQHIYALPVYAYLNQDFLSQAALYVHHQYIAGLLIMGGFVHGTLFLIYDYQQNSIWDRIFFSAVFKFLDNKLNIILWLSWITFFLGFHTLGLYVHNDVVTAFGHSERQILLQPVFAQLIQTASGKNIYYPDFVKLFYPLNQRDPRFLNGWLETINNLKVSPFLNVGPGDFLVHHAIALGLHTTVLILIKGAIDSRGSRFMPDKQAFGYTFPCDGPGRGGTCDISAWDSFYLAMFWMLNTIGWVTFYWHWKHLALWGGTNRLFDESSVCLMGWLRDYLWLNSSKLIYGYTSETVSINSVWAWAFLLGHLVWATGFMFLISWRGYWQELIETLVWAHERTPIANLFQWADTPVALSILQARFVGLVHFTVGYILTYAAFLLASTPV
Photosystem I iron-sulfur center C 80 Chromera Velia MHNVGIYTTCIGCTQCVRACPTEVLDMMTWDHCRAQQIACSDTLQDCIGCKRCETACPTDFLSIRVELGTENYYSMGLAY
Photosystem I reaction center subunit II D 269 Chromera Velia MKFLAVAALICVGGARAFVAPSAPSNRQLATELRAGVPANPKPGSQFDLSVPDKDTLIRRRGGRGWLGKANNYGRFLISWTHNKAEPFPCPTGGSSLMKPGANRLLLAKKEQGIALGRWLKRTLKIDNWKIFEIKPDGTVIFRSPKDGIYPEKKDPERVKRLTLLGSSYDNQERMARYSARKQFRSYEKYLKEQGEMATWQYILQRFRAESIQAFDADFGDMDVQEAQREGYAKMRAEKQKEMGEGVISPAMIQMYMQILKDPYKGRRD
Photosystem I reaction center subunit IV E 133 Chromera Velia MKLASALLLLCLSATCAFARRLSGFLSGLPSRQRDGARQATVLEAIQKGSKVLILKPESYFYGFTGDVVVVDKNPFYPYGVTVKFPSMQYKGLNTFNFKLDELQEVAPPAPKKKKKKAAVNPAAEPAEPAASS
Photosystem I reaction center subunit III F 326 Chromera Velia MRVSLCMAIGAASVASEASAFVAPPSRMGRGLLSSQLRAERPSKTEASEARSKEFDESIFDQAMLEDDDSAFDPMMDFARLATPAAIAMAAATVAPQVAHAADATLVPCAESKRFQTIMKAEIKANEKRVKENPKGSFFRDQFIAELKRSKIRKWRFEHSSLMCSKEDGKPRVDVTNPNQIFGGFFAFVYVLGAIGWSAKTYNRGIKAAYGPDGGWKEVILDWPFVLQVFYHSLGWPGRTWKELLDPEKEKDHLLVPTGKFDGLPTAIQAIGIGGVGLTIWLIITSFMMIGALYFFPDVLALDLLKYPVVNLSVPGVDIPGLNDIP
Photosystem I protein (PsaV) U 424 Chromera Velia MVRGGLSTVVSAALVGCAVAFTGTPLKPPSSDTSLSAVKKSSKKFGDLSQFTGDVKGDAEAYRQILYATTGDPKYKKAKKSVGLIKWMKQMDPNEFKLKFIVVPGLLTVAAAGAFVALSNLDLPTLPSTPSPEDAGKFFLTIPAVGTIRAKPLLGDSGAFLPGSEPAPKITSKAEQVAIQKKIKAKITPAAKEAAKKLSLPKPGAKMSGGFVQRFIDASPERKDPGLDLIKDSVSDASKFSAPTQTLNVAGSIDSLLAKANLPSVDLTFSPAVEPAYALWEGGGKSTDPAYPGRAGFDEFKKEQMKIAAKTPTMTYFGESIKGDPRPGLKTYGMPQEYIDRMRKNTQWMKDRGVVFYPGYKEGSINREWTKLIKRSPTVEEQKKFISQHPEYLYNVQIPGMDDAKAIQKIQPKMEPKVWRRVGP
photosystem I A 395 Chromera Velia MPLNGLLAVQLWFFGTVSILVAHVMFAFPPYPFLAQNYATQISLFTHHMWIGGFLLVGSGAHASLYLIREQGDLTRTNSLVALCLNYRDAIISHLNWLCIFLGLHSFGIYIHNDTLAALGRFDDQITNLPPLGAEWFQHAVTANFPINNGFKNHFNTQILMNDKIVFSNLSFNTADFLVHHIHAFTIHVTVLILVKGILFSRDSNLISDKYALGFRFPCDGPGRGGTCQVSGWDHIFLALFWMYNSISVVIFHFFWKVQSDVWGYQSLDNGITHITNGNFTKSALTINGWLRDFLWAEAAQVVQSYSTPFFVYGLVFLGAHFIWAFSLMFLFSGRGYWQELIDYYTYAVYKWSQLPYLAFQALSIVQGRAVGLAHYLLGGIGTTWAFFLARALTL
Superoxide dismutase [Fe] 2 267 Chromera Velia MRFATLSLLGFFGASEAIRSRDLQAFVVSAPGASSPSRRSPATALDAVAVGSNVYEKMGVSTLVSGEEGPFKLKELPWFPTVLAPMMSYETISYHYGKHHALYVRNLNALAKEDSSLASKSLEDIFKGAEKGKKLFNQAAQVWNHDFFWNSMSPEGGDESFSETSKVKSAIISQWEDLGKFKEEWVKLALKHFGSGWIWLVQQKDGKLAIVDTHNAMNPISENLGTPLMTMDIWEHAYYVDHKSNKGLYTASFFEVCNWDFAEKNME
Photosystem I protein (PsaI) I 211 Chromera Velia MQVVSVFAAVALAASSASAFVPSTSRSSGLLSKQRKTELNALEDAFFAPVEELMNAAPASVDFSDAISSSSEVLASIAADSKLAVDVQGELVPAMIAAAEKLAANPGAKAGEILDPNSKLVQLRQVGGLVTGRHGVTNFDNKVPFLLLGAAPALFHTFLFFGLATVFVFKQENETPFRRQYGGTGYPRLDPYTMHRGDKPRERDWNDPITM
Photosystem I reaction center subunit V L 277 Chromera Velia MKVALGFLASFVCGSAARDTGFLSPAQRLASSGSRRKASSPVDPVSSLFDASTSEPGKVSKFAGWSPTLSEMPSAWEGYSVLRDSDASRTLLTKIPVYRRGLPPSWAGLEVGMAHGYLFFGPFAFLGPLRDSEEFWALAGLAASSGFDMILTIGLTVYGAYQDKWKLCNPCDKWITRNYSGGFDVKPSPDLTPIGNALVSGPGNNGFFLSDPRSPNSMYEDFQKFTTMFLIGALGGSLFAYYLCATTHAFDPVGGIRTFLGVPAITGYEPPPQAIIP
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-01-10
Deposition Author(s): Naschberger, A. , Qian, P. , Sobotka, R. , Yuan, X.