9HU3
Pr1 phage heterodimeric dna ligase in complex with 21-mer nicked dna containing phage nick sequence
PDB DOI: 10.2210/pdb9hu3/pdb
Classification: DNA BINDING PROTEIN Organism(s): Providencia Phage Vb_Pres_Pr1 , Synthetic Construct
Deposited: 2024-12-20 Deposition Author(s): Macneill, S. , Richardson, J.M. , Zhang, L.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.16 Å
Pr1 phage heterodimeric dna ligase in complex with 21-mer nicked dna containing phage nick sequence
Macneill, S. , Richardson, J.M. , Zhang, L.
Primary Citation of Related Structures: 9HU3
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA ligase (NAD(+)) | A | 339 | Providencia Phage Vb_Pres_Pr1 , Synthetic Construct | GNSGDPMVLAIKNYIRDCQDAYYNGDPIISDEQYDKLIAKYPDAEDQIGTIGDVPHMFRMYSLRKYYPSRGDELPEGFDIETPKLDGCAVEHLYIDGVYVSSTTRGNGKLGKDCTHNLSMLVPKNINGIIRSPVPRVIQIRGEVVVSKPEGLENVRNYASGKVNLKDSTEFAQAVEEGGLMFIAYGVNSNNHEGYTEWYDKDMELLSTFGFFTCLDKTIKIATDDGDILTDGLVRRVNSNSEYEKLGFTDKFPRGAYAIKEDEEGEVTTLREVQWQVGKSGKVTPVGIFDTVIIDDAQISKATLNNAGFIEAMELTIGCQIRVIRSGGVIPKIVEKVED |
| DNA ligase (NAD(+)) | E | 339 | Providencia Phage Vb_Pres_Pr1 , Synthetic Construct | GNSGDPMVLAIKNYIRDCQDAYYNGDPIISDEQYDKLIAKYPDAEDQIGTIGDVPHMFRMYSLRKYYPSRGDELPEGFDIETPKLDGCAVEHLYIDGVYVSSTTRGNGKLGKDCTHNLSMLVPKNINGIIRSPVPRVIQIRGEVVVSKPEGLENVRNYASGKVNLKDSTEFAQAVEEGGLMFIAYGVNSNNHEGYTEWYDKDMELLSTFGFFTCLDKTIKIATDDGDILTDGLVRRVNSNSEYEKLGFTDKFPRGAYAIKEDEEGEVTTLREVQWQVGKSGKVTPVGIFDTVIIDDAQISKATLNNAGFIEAMELTIGCQIRVIRSGGVIPKIVEKVED |
| DNA ligase subunit B | B | 248 | Providencia Phage Vb_Pres_Pr1 , Synthetic Construct | MKIQIPTHCPICGSVLERVNSQLFCRNKDNCSAQSSKSLESFCKKMKLKGFGEKTLEKLELTSVPELFYIDSSFLEEILGEKIGNKLSAELDRMRTSVEMSTLLASLSIPLVGTVAAEKAVAGATSLADTKLSGKAGESLEVWKHSDLGKEIMALPWNFTKVTQVVNETESLGIAVCVTGSVEGHTRTSITKHLESLGFTVKKSVTKDVKYLICEDESKRSSSSYLKALENGVEIGSLTKLILKYKRK |
| DNA ligase subunit B | F | 248 | Providencia Phage Vb_Pres_Pr1 , Synthetic Construct | MKIQIPTHCPICGSVLERVNSQLFCRNKDNCSAQSSKSLESFCKKMKLKGFGEKTLEKLELTSVPELFYIDSSFLEEILGEKIGNKLSAELDRMRTSVEMSTLLASLSIPLVGTVAAEKAVAGATSLADTKLSGKAGESLEVWKHSDLGKEIMALPWNFTKVTQVVNETESLGIAVCVTGSVEGHTRTSITKHLESLGFTVKKSVTKDVKYLICEDESKRSSSSYLKALENGVEIGSLTKLILKYKRK |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2024-12-20 Deposition Author(s): Macneill, S. , Richardson, J.M. , Zhang, L.