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9HBP

Cryo-em structure of the canine distemper virus tetrameric attachment h glycoprotein in complex with two different nanobodies

PDB DOI: 10.2210/pdb9hbp/pdb

Classification: VIRAL PROTEIN
Organism(s): Lama Glama , Morbillivirus Canis

Deposited: 2024-11-07
Deposition Author(s): Djabeur, N. , Fotiadis, D. , Jeckelmann, J.M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.3 Å

9hbp
Literature

Cryo-em structure of the canine distemper virus tetrameric attachment h glycoprotein in complex with two different nanobodies

Djabeur, N. , Fotiadis, D. , Jeckelmann, J.M.

Primary Citation of Related Structures: 9HBP


Proteins
Molecule Chains Sequence Length Organism Sequence
Hemagglutinin glycoprotein A 607 Lama Glama , Morbillivirus Canis MLSYQDKVSAFYKDNARANSSKLSLVTEEQGGRRPPYLLFVLLILLVGIMALLAITGVRFHQVSTSNMEFSRLLKEDMEKSEAVHHQVIDVLTPLFKIIGDEIGLRLPQKLNEIKQFILQKTNFFNPNREFDFRDLHWCINPPSKIKVNFTNYCDTIGIRKSIASAANPILLSALSGGRGDIFPPYRCSGATTSVGRVFPLSVSLSMSLISRTSEIINMLTAISDGVYGKTYLLVPDYIEGGFDTQKIRVFEIGFIKRWLNDMPLLQTTNYMVLPENSKAKVCTIAVGELTLASLCVDESTVLLYHDSDGSQDGILVVTLGIFGATPMDQVEEVIPVAHPSVEKIHITNHRGFIKDSIATWMVPALVSEKQEEQKNCLESACQRKSYPMCNQTSWEPFGGGQLPSYGRLTLPLDPSIDLQLNISFTYGPVILNGDGMDYYESPLLDSGWLTIPPKNGTVLGLINKASRGDQFTVIPHVLTFAPRESSGNCYLPIQTSQIMDKDVLTESNLVVLPTQNFRYVIATYDISRGDHAIVYYVYDPIRAISYTYPFRLTTKGRPDFLRIECFVWDDDLWCHQFYRFEADSTNSTTSVENLVRIRFSCNRSKP
Hemagglutinin glycoprotein B 607 Lama Glama , Morbillivirus Canis MLSYQDKVSAFYKDNARANSSKLSLVTEEQGGRRPPYLLFVLLILLVGIMALLAITGVRFHQVSTSNMEFSRLLKEDMEKSEAVHHQVIDVLTPLFKIIGDEIGLRLPQKLNEIKQFILQKTNFFNPNREFDFRDLHWCINPPSKIKVNFTNYCDTIGIRKSIASAANPILLSALSGGRGDIFPPYRCSGATTSVGRVFPLSVSLSMSLISRTSEIINMLTAISDGVYGKTYLLVPDYIEGGFDTQKIRVFEIGFIKRWLNDMPLLQTTNYMVLPENSKAKVCTIAVGELTLASLCVDESTVLLYHDSDGSQDGILVVTLGIFGATPMDQVEEVIPVAHPSVEKIHITNHRGFIKDSIATWMVPALVSEKQEEQKNCLESACQRKSYPMCNQTSWEPFGGGQLPSYGRLTLPLDPSIDLQLNISFTYGPVILNGDGMDYYESPLLDSGWLTIPPKNGTVLGLINKASRGDQFTVIPHVLTFAPRESSGNCYLPIQTSQIMDKDVLTESNLVVLPTQNFRYVIATYDISRGDHAIVYYVYDPIRAISYTYPFRLTTKGRPDFLRIECFVWDDDLWCHQFYRFEADSTNSTTSVENLVRIRFSCNRSKP
Hemagglutinin glycoprotein C 607 Lama Glama , Morbillivirus Canis MLSYQDKVSAFYKDNARANSSKLSLVTEEQGGRRPPYLLFVLLILLVGIMALLAITGVRFHQVSTSNMEFSRLLKEDMEKSEAVHHQVIDVLTPLFKIIGDEIGLRLPQKLNEIKQFILQKTNFFNPNREFDFRDLHWCINPPSKIKVNFTNYCDTIGIRKSIASAANPILLSALSGGRGDIFPPYRCSGATTSVGRVFPLSVSLSMSLISRTSEIINMLTAISDGVYGKTYLLVPDYIEGGFDTQKIRVFEIGFIKRWLNDMPLLQTTNYMVLPENSKAKVCTIAVGELTLASLCVDESTVLLYHDSDGSQDGILVVTLGIFGATPMDQVEEVIPVAHPSVEKIHITNHRGFIKDSIATWMVPALVSEKQEEQKNCLESACQRKSYPMCNQTSWEPFGGGQLPSYGRLTLPLDPSIDLQLNISFTYGPVILNGDGMDYYESPLLDSGWLTIPPKNGTVLGLINKASRGDQFTVIPHVLTFAPRESSGNCYLPIQTSQIMDKDVLTESNLVVLPTQNFRYVIATYDISRGDHAIVYYVYDPIRAISYTYPFRLTTKGRPDFLRIECFVWDDDLWCHQFYRFEADSTNSTTSVENLVRIRFSCNRSKP
Hemagglutinin glycoprotein D 607 Lama Glama , Morbillivirus Canis MLSYQDKVSAFYKDNARANSSKLSLVTEEQGGRRPPYLLFVLLILLVGIMALLAITGVRFHQVSTSNMEFSRLLKEDMEKSEAVHHQVIDVLTPLFKIIGDEIGLRLPQKLNEIKQFILQKTNFFNPNREFDFRDLHWCINPPSKIKVNFTNYCDTIGIRKSIASAANPILLSALSGGRGDIFPPYRCSGATTSVGRVFPLSVSLSMSLISRTSEIINMLTAISDGVYGKTYLLVPDYIEGGFDTQKIRVFEIGFIKRWLNDMPLLQTTNYMVLPENSKAKVCTIAVGELTLASLCVDESTVLLYHDSDGSQDGILVVTLGIFGATPMDQVEEVIPVAHPSVEKIHITNHRGFIKDSIATWMVPALVSEKQEEQKNCLESACQRKSYPMCNQTSWEPFGGGQLPSYGRLTLPLDPSIDLQLNISFTYGPVILNGDGMDYYESPLLDSGWLTIPPKNGTVLGLINKASRGDQFTVIPHVLTFAPRESSGNCYLPIQTSQIMDKDVLTESNLVVLPTQNFRYVIATYDISRGDHAIVYYVYDPIRAISYTYPFRLTTKGRPDFLRIECFVWDDDLWCHQFYRFEADSTNSTTSVENLVRIRFSCNRSKP
Nanobody H7 E 124 Lama Glama , Morbillivirus Canis EVQLVESGGGVVRPGRSLRLSCTVSGDIFGMDAIFSFSAMGWYRQAPGNQRELVATMSRAGSTNFADSVKGRFTISRDNAKKTLYLQMNNLKPEDTAVYYCNVPLGPQGNWGQGTQVTVSSAAA
Nanobody H7 F 124 Lama Glama , Morbillivirus Canis EVQLVESGGGVVRPGRSLRLSCTVSGDIFGMDAIFSFSAMGWYRQAPGNQRELVATMSRAGSTNFADSVKGRFTISRDNAKKTLYLQMNNLKPEDTAVYYCNVPLGPQGNWGQGTQVTVSSAAA
Nanobody H7 I 124 Lama Glama , Morbillivirus Canis EVQLVESGGGVVRPGRSLRLSCTVSGDIFGMDAIFSFSAMGWYRQAPGNQRELVATMSRAGSTNFADSVKGRFTISRDNAKKTLYLQMNNLKPEDTAVYYCNVPLGPQGNWGQGTQVTVSSAAA
Nanobody H7 J 124 Lama Glama , Morbillivirus Canis EVQLVESGGGVVRPGRSLRLSCTVSGDIFGMDAIFSFSAMGWYRQAPGNQRELVATMSRAGSTNFADSVKGRFTISRDNAKKTLYLQMNNLKPEDTAVYYCNVPLGPQGNWGQGTQVTVSSAAA
Nanobody H9 G 127 Lama Glama , Morbillivirus Canis EVQLVESGGGLVQAGGSLRLTCAASGSIFSINTMGWYRQAPGKERELVATITSGGSTKYADSVKDRFIISRDKRKNTVYLQMNSLKPEDTAVYVCNARIRPYIYSALQPENDYWGQGTQVTVSSAAA
Nanobody H9 H 127 Lama Glama , Morbillivirus Canis EVQLVESGGGLVQAGGSLRLTCAASGSIFSINTMGWYRQAPGKERELVATITSGGSTKYADSVKDRFIISRDKRKNTVYLQMNSLKPEDTAVYVCNARIRPYIYSALQPENDYWGQGTQVTVSSAAA
Nanobody H9 K 127 Lama Glama , Morbillivirus Canis EVQLVESGGGLVQAGGSLRLTCAASGSIFSINTMGWYRQAPGKERELVATITSGGSTKYADSVKDRFIISRDKRKNTVYLQMNSLKPEDTAVYVCNARIRPYIYSALQPENDYWGQGTQVTVSSAAA
Nanobody H9 L 127 Lama Glama , Morbillivirus Canis EVQLVESGGGLVQAGGSLRLTCAASGSIFSINTMGWYRQAPGKERELVATITSGGSTKYADSVKDRFIISRDKRKNTVYLQMNSLKPEDTAVYVCNARIRPYIYSALQPENDYWGQGTQVTVSSAAA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-11-07
Deposition Author(s): Djabeur, N. , Fotiadis, D. , Jeckelmann, J.M.