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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9GY7

C. thermocellum uvra-uvrb in complex with dna with a fluorescein modification and amppnp

PDB DOI: 10.2210/pdb9gy7/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Acetivibrio Thermocellus , Synthetic Construct

Deposited: 2024-10-01
Deposition Author(s): Czarnocki-Cieciura, M. , Nirwal, S. , Nowotny, M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.18 Å

9gy7
Literature

C. thermocellum uvra-uvrb in complex with dna with a fluorescein modification and amppnp

Czarnocki-Cieciura, M. , Nirwal, S. , Nowotny, M.

Primary Citation of Related Structures: 9GY7


Proteins
Molecule Chains Sequence Length Organism Sequence
UvrABC system protein A A 962 Acetivibrio Thermocellus , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMKKDYIVVKGAREHNLKNIDVKIPRDKFVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSSYARQFLGQMEKPDVDYIDGLSPAIAIDQKTTSRNPRSTVGTVTEIYDYLRLLFARIGTPHCYLCGREISQQTVDQMVDRIMEFEEGTRIQLLAPVVRGRKGEYHKLIEDIKKEGYVRIRVDGEVVDVNDPVNLDKNKKHNIEIVVDRLIVRPGIQKRLTDSIETVLRLSNGILVVDVIGGKEMLLSQNFACTECNVSMEEITPRMFSFNNPYGACPECTGLGSLMRIDPDLVIPDKKLSLAQGAVRASGWNIANDESYARMYIDALAKHYNFSVDTPVEELPPHILDIILYGTNGEKIKIEYERENEKGTFMASFPGIINSMERRYKETTSEVMKQYYENFMSNIPCPVCKGARLKKESLAVTIGGKNIYEVCCLSIGEAKEFFANLNLTERQQLIARQILKEINARLGFLVDVGLDYLTLARAAGTLSGGEAQRIRLATQIGSGLMGVIYILDEPSIGLHQRDNDRLLRSLKKLRDLGNTLLVVEHDEDTMYASDYIIDLGPGAGSHGGQIVAEGTVEEIKQNPNSVTGEYLSGRKKIEVPKERRKPNGKWLEIIGARENNLKNINVRIPLGVFTCITGVSGSGKSSLINEILYKRLAAELNRASVKPGEHDLIKGIEYLDKVIDIDQSPIGRTPRSNPATYTGVFDFIREIFANTTEAKTRGYKAGRFSFNVKGGRCEACAGDGINKIEMHFLPDIYVPCEVCKGKRYNRETLEVRYKGKNIAEVLDMTVEEALEFFKNIPRIHKKIETLYDVGLGYIKLGQSSTTLSGGEAQRVKLATELSRKSTGKTMYILDEPTTGLHMADVHRLVGILHRLVEAGNSVVVIEHNLDVIKTADYIIDLGPEGGSGGGLVVAEGTPEEVAKVENSYTGQFLKKVLST
UvrABC system protein A B 962 Acetivibrio Thermocellus , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMKKDYIVVKGAREHNLKNIDVKIPRDKFVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSSYARQFLGQMEKPDVDYIDGLSPAIAIDQKTTSRNPRSTVGTVTEIYDYLRLLFARIGTPHCYLCGREISQQTVDQMVDRIMEFEEGTRIQLLAPVVRGRKGEYHKLIEDIKKEGYVRIRVDGEVVDVNDPVNLDKNKKHNIEIVVDRLIVRPGIQKRLTDSIETVLRLSNGILVVDVIGGKEMLLSQNFACTECNVSMEEITPRMFSFNNPYGACPECTGLGSLMRIDPDLVIPDKKLSLAQGAVRASGWNIANDESYARMYIDALAKHYNFSVDTPVEELPPHILDIILYGTNGEKIKIEYERENEKGTFMASFPGIINSMERRYKETTSEVMKQYYENFMSNIPCPVCKGARLKKESLAVTIGGKNIYEVCCLSIGEAKEFFANLNLTERQQLIARQILKEINARLGFLVDVGLDYLTLARAAGTLSGGEAQRIRLATQIGSGLMGVIYILDEPSIGLHQRDNDRLLRSLKKLRDLGNTLLVVEHDEDTMYASDYIIDLGPGAGSHGGQIVAEGTVEEIKQNPNSVTGEYLSGRKKIEVPKERRKPNGKWLEIIGARENNLKNINVRIPLGVFTCITGVSGSGKSSLINEILYKRLAAELNRASVKPGEHDLIKGIEYLDKVIDIDQSPIGRTPRSNPATYTGVFDFIREIFANTTEAKTRGYKAGRFSFNVKGGRCEACAGDGINKIEMHFLPDIYVPCEVCKGKRYNRETLEVRYKGKNIAEVLDMTVEEALEFFKNIPRIHKKIETLYDVGLGYIKLGQSSTTLSGGEAQRVKLATELSRKSTGKTMYILDEPTTGLHMADVHRLVGILHRLVEAGNSVVVIEHNLDVIKTADYIIDLGPEGGSGGGLVVAEGTPEEVAKVENSYTGQFLKKVLST
UvrABC system protein B E 661 Acetivibrio Thermocellus , Synthetic Construct SMHKFKLVSDYKPCGDQPEAIDKLVEGINRGYRGQTLLGVTGSGKTFTMANVIERVQKPTLVIAHNKTLAAQLCSEFKEFFPNNCVEYFVSYYDYYQPEAYIPATDTYIEKDSSINDEIDKLRHSATAALFERRDVIIVASVSCIYGLGDPEDYTDLMLSLRPGMIKDRDEIIRKLVDIQYERNEIDFKRGKFRVRGDILEIFPASSSDKVIRVEFFGEEIDRITEVDSLTGEITGVCSHVAIFPASHYATTKAKMQRAIASIEQELEERVRELKSQGKLLEAQRLEQRTRYDLEMMQEIGFCQGIENYSRHISGRAPGSPPFTLIDYFPKDFLLIIDESHVTIPQIGAMYNGDRSRKESLVEYGFRLPSAFDNRPLTFEEFEKKINQVIFVSATPAKYEREHSQQIVEQIIRPTGLLDPEIVVKPVKGQIDDLIGEISERVQKNQRVMITTLTKKMAEDLTDYLRELDFKVEYLHSDIDTIERMEIIRNLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSETSLIQTIGRAARNVEGKVIMYADTITDSMRRAIDETNRRRKIQSEYNQKHGITPKSVQKGIRDVIEITKVAEEDAKYFIRGDEDSMDKDEVLDLIEKLTNEMKAAAAELQFERAAELRDKIAELKKKIGA
UvrABC system protein B F 661 Acetivibrio Thermocellus , Synthetic Construct SMHKFKLVSDYKPCGDQPEAIDKLVEGINRGYRGQTLLGVTGSGKTFTMANVIERVQKPTLVIAHNKTLAAQLCSEFKEFFPNNCVEYFVSYYDYYQPEAYIPATDTYIEKDSSINDEIDKLRHSATAALFERRDVIIVASVSCIYGLGDPEDYTDLMLSLRPGMIKDRDEIIRKLVDIQYERNEIDFKRGKFRVRGDILEIFPASSSDKVIRVEFFGEEIDRITEVDSLTGEITGVCSHVAIFPASHYATTKAKMQRAIASIEQELEERVRELKSQGKLLEAQRLEQRTRYDLEMMQEIGFCQGIENYSRHISGRAPGSPPFTLIDYFPKDFLLIIDESHVTIPQIGAMYNGDRSRKESLVEYGFRLPSAFDNRPLTFEEFEKKINQVIFVSATPAKYEREHSQQIVEQIIRPTGLLDPEIVVKPVKGQIDDLIGEISERVQKNQRVMITTLTKKMAEDLTDYLRELDFKVEYLHSDIDTIERMEIIRNLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSETSLIQTIGRAARNVEGKVIMYADTITDSMRRAIDETNRRRKIQSEYNQKHGITPKSVQKGIRDVIEITKVAEEDAKYFIRGDEDSMDKDEVLDLIEKLTNEMKAAAAELQFERAAELRDKIAELKKKIGA

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (50-MER) with a fluorescein modification - (random sequence built in model) c 50 NA GCATCGTACTGTTACGGCTCCATCAGATGGAGCCGTAACAGTACGATGCA
DNA (50-MER) with a fluorescein modification - (random sequence built in model) d 50 NA GCATCGTACTGTTACGGCTCCATCAGATGGAGCCGTAACAGTACGATGCA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-10-01
Deposition Author(s): Czarnocki-Cieciura, M. , Nirwal, S. , Nowotny, M.