PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9GTS

Cryo-em structure of a contractile injection system in streptomyces coelicolor, the cap portion in extended state.

PDB DOI: 10.2210/pdb9gts/pdb

Classification: STRUCTURAL PROTEIN
Organism(s): Streptomyces Coelicolor A3(2)

Deposited: 2024-09-18
Deposition Author(s): Afanasyev, P. , Casu, B. , Hass, P.E. , Pilhofer, M. , Sallmen, J.W. , Schlimpert, S. , Xu, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.4 Å

9gts
Literature

Cryo-em structure of a contractile injection system in streptomyces coelicolor, the cap portion in extended state.

Afanasyev, P. , Casu, B. , Hass, P.E. , Pilhofer, M. , Sallmen, J.W. , Schlimpert, S. , Xu, J.

Primary Citation of Related Structures: 9GTS


Proteins
Molecule Chains Sequence Length Organism Sequence
Phage tail protein 1A 149 Streptomyces Coelicolor A3(2) MSLPKPEDVLVAPNFGIQIDGVMVEYLNSVSNLQIEQDVIRYQQNQGTTGRNNVTLMPGVAKDGSVQVERGMSQSSVFTQWINDSMAGRMATARKNATIIVMDYEDNPVKRWNLRNAWCSKVVAGTLKAGDTNALTETITIVFEELVVE
Phage tail protein 1F 149 Streptomyces Coelicolor A3(2) MSLPKPEDVLVAPNFGIQIDGVMVEYLNSVSNLQIEQDVIRYQQNQGTTGRNNVTLMPGVAKDGSVQVERGMSQSSVFTQWINDSMAGRMATARKNATIIVMDYEDNPVKRWNLRNAWCSKVVAGTLKAGDTNALTETITIVFEELVVE
Phage tail protein 1E 149 Streptomyces Coelicolor A3(2) MSLPKPEDVLVAPNFGIQIDGVMVEYLNSVSNLQIEQDVIRYQQNQGTTGRNNVTLMPGVAKDGSVQVERGMSQSSVFTQWINDSMAGRMATARKNATIIVMDYEDNPVKRWNLRNAWCSKVVAGTLKAGDTNALTETITIVFEELVVE
Phage tail protein 1D 149 Streptomyces Coelicolor A3(2) MSLPKPEDVLVAPNFGIQIDGVMVEYLNSVSNLQIEQDVIRYQQNQGTTGRNNVTLMPGVAKDGSVQVERGMSQSSVFTQWINDSMAGRMATARKNATIIVMDYEDNPVKRWNLRNAWCSKVVAGTLKAGDTNALTETITIVFEELVVE
Phage tail protein 1C 149 Streptomyces Coelicolor A3(2) MSLPKPEDVLVAPNFGIQIDGVMVEYLNSVSNLQIEQDVIRYQQNQGTTGRNNVTLMPGVAKDGSVQVERGMSQSSVFTQWINDSMAGRMATARKNATIIVMDYEDNPVKRWNLRNAWCSKVVAGTLKAGDTNALTETITIVFEELVVE
Phage tail protein 1B 149 Streptomyces Coelicolor A3(2) MSLPKPEDVLVAPNFGIQIDGVMVEYLNSVSNLQIEQDVIRYQQNQGTTGRNNVTLMPGVAKDGSVQVERGMSQSSVFTQWINDSMAGRMATARKNATIIVMDYEDNPVKRWNLRNAWCSKVVAGTLKAGDTNALTETITIVFEELVVE
Phage tail sheath family protein 2A 539 Streptomyces Coelicolor A3(2) MPSYLSPGVYVEEVASGSRPIEGVGIEGVGTSVAAFVGLAPTGPLNEPTLVTNWTQYVAAFGDFTGGYYLAHSVYGFFNNGGSAAYVVRVGGSAEDAAADGSVNGAAAPAAVTGSTAKALPAAEPKQLGTFAVTATAAGQSGPLTVEVADPEGEGPAERFKLIVKDGDKPVETFDVSAKKGNRSYVVTQVKERSKLITVTEAAPSAQLVRPENQSLTLPAPPSAAPAVPAGQAESAHPGPAQYLGDSSDRTGFGGLEAIDEISMVAVPDLMAAYQRGAIDLEAVKAVQLGLIAHCELMGDRVAIIDPPPNQNARQIRVWRQETAGYDSKYAALYYPWIKSFDPATGQSRLVPPSGHVAGIWARNDSERGVHKAPANEVVRGAVDLELQITRGEQDLLNPIGVNCIRSFPGRGIRVWGARTLSSDPAWRYLNIRRYFNYLEESILIGTQWVVFEPNDHNLWARIRRNVSAFLVNEWRNGALFGQSPDQAYYVKCDEETNPPESVDLGRVVCEIGIAPVKPAEFVIFRLAQFSSGGGELDE
Phage tail sheath family protein 2F 539 Streptomyces Coelicolor A3(2) MPSYLSPGVYVEEVASGSRPIEGVGIEGVGTSVAAFVGLAPTGPLNEPTLVTNWTQYVAAFGDFTGGYYLAHSVYGFFNNGGSAAYVVRVGGSAEDAAADGSVNGAAAPAAVTGSTAKALPAAEPKQLGTFAVTATAAGQSGPLTVEVADPEGEGPAERFKLIVKDGDKPVETFDVSAKKGNRSYVVTQVKERSKLITVTEAAPSAQLVRPENQSLTLPAPPSAAPAVPAGQAESAHPGPAQYLGDSSDRTGFGGLEAIDEISMVAVPDLMAAYQRGAIDLEAVKAVQLGLIAHCELMGDRVAIIDPPPNQNARQIRVWRQETAGYDSKYAALYYPWIKSFDPATGQSRLVPPSGHVAGIWARNDSERGVHKAPANEVVRGAVDLELQITRGEQDLLNPIGVNCIRSFPGRGIRVWGARTLSSDPAWRYLNIRRYFNYLEESILIGTQWVVFEPNDHNLWARIRRNVSAFLVNEWRNGALFGQSPDQAYYVKCDEETNPPESVDLGRVVCEIGIAPVKPAEFVIFRLAQFSSGGGELDE
Phage tail sheath family protein 2E 539 Streptomyces Coelicolor A3(2) MPSYLSPGVYVEEVASGSRPIEGVGIEGVGTSVAAFVGLAPTGPLNEPTLVTNWTQYVAAFGDFTGGYYLAHSVYGFFNNGGSAAYVVRVGGSAEDAAADGSVNGAAAPAAVTGSTAKALPAAEPKQLGTFAVTATAAGQSGPLTVEVADPEGEGPAERFKLIVKDGDKPVETFDVSAKKGNRSYVVTQVKERSKLITVTEAAPSAQLVRPENQSLTLPAPPSAAPAVPAGQAESAHPGPAQYLGDSSDRTGFGGLEAIDEISMVAVPDLMAAYQRGAIDLEAVKAVQLGLIAHCELMGDRVAIIDPPPNQNARQIRVWRQETAGYDSKYAALYYPWIKSFDPATGQSRLVPPSGHVAGIWARNDSERGVHKAPANEVVRGAVDLELQITRGEQDLLNPIGVNCIRSFPGRGIRVWGARTLSSDPAWRYLNIRRYFNYLEESILIGTQWVVFEPNDHNLWARIRRNVSAFLVNEWRNGALFGQSPDQAYYVKCDEETNPPESVDLGRVVCEIGIAPVKPAEFVIFRLAQFSSGGGELDE
Phage tail sheath family protein 2D 539 Streptomyces Coelicolor A3(2) MPSYLSPGVYVEEVASGSRPIEGVGIEGVGTSVAAFVGLAPTGPLNEPTLVTNWTQYVAAFGDFTGGYYLAHSVYGFFNNGGSAAYVVRVGGSAEDAAADGSVNGAAAPAAVTGSTAKALPAAEPKQLGTFAVTATAAGQSGPLTVEVADPEGEGPAERFKLIVKDGDKPVETFDVSAKKGNRSYVVTQVKERSKLITVTEAAPSAQLVRPENQSLTLPAPPSAAPAVPAGQAESAHPGPAQYLGDSSDRTGFGGLEAIDEISMVAVPDLMAAYQRGAIDLEAVKAVQLGLIAHCELMGDRVAIIDPPPNQNARQIRVWRQETAGYDSKYAALYYPWIKSFDPATGQSRLVPPSGHVAGIWARNDSERGVHKAPANEVVRGAVDLELQITRGEQDLLNPIGVNCIRSFPGRGIRVWGARTLSSDPAWRYLNIRRYFNYLEESILIGTQWVVFEPNDHNLWARIRRNVSAFLVNEWRNGALFGQSPDQAYYVKCDEETNPPESVDLGRVVCEIGIAPVKPAEFVIFRLAQFSSGGGELDE
Phage tail sheath family protein 2C 539 Streptomyces Coelicolor A3(2) MPSYLSPGVYVEEVASGSRPIEGVGIEGVGTSVAAFVGLAPTGPLNEPTLVTNWTQYVAAFGDFTGGYYLAHSVYGFFNNGGSAAYVVRVGGSAEDAAADGSVNGAAAPAAVTGSTAKALPAAEPKQLGTFAVTATAAGQSGPLTVEVADPEGEGPAERFKLIVKDGDKPVETFDVSAKKGNRSYVVTQVKERSKLITVTEAAPSAQLVRPENQSLTLPAPPSAAPAVPAGQAESAHPGPAQYLGDSSDRTGFGGLEAIDEISMVAVPDLMAAYQRGAIDLEAVKAVQLGLIAHCELMGDRVAIIDPPPNQNARQIRVWRQETAGYDSKYAALYYPWIKSFDPATGQSRLVPPSGHVAGIWARNDSERGVHKAPANEVVRGAVDLELQITRGEQDLLNPIGVNCIRSFPGRGIRVWGARTLSSDPAWRYLNIRRYFNYLEESILIGTQWVVFEPNDHNLWARIRRNVSAFLVNEWRNGALFGQSPDQAYYVKCDEETNPPESVDLGRVVCEIGIAPVKPAEFVIFRLAQFSSGGGELDE
Phage tail sheath family protein 2B 539 Streptomyces Coelicolor A3(2) MPSYLSPGVYVEEVASGSRPIEGVGIEGVGTSVAAFVGLAPTGPLNEPTLVTNWTQYVAAFGDFTGGYYLAHSVYGFFNNGGSAAYVVRVGGSAEDAAADGSVNGAAAPAAVTGSTAKALPAAEPKQLGTFAVTATAAGQSGPLTVEVADPEGEGPAERFKLIVKDGDKPVETFDVSAKKGNRSYVVTQVKERSKLITVTEAAPSAQLVRPENQSLTLPAPPSAAPAVPAGQAESAHPGPAQYLGDSSDRTGFGGLEAIDEISMVAVPDLMAAYQRGAIDLEAVKAVQLGLIAHCELMGDRVAIIDPPPNQNARQIRVWRQETAGYDSKYAALYYPWIKSFDPATGQSRLVPPSGHVAGIWARNDSERGVHKAPANEVVRGAVDLELQITRGEQDLLNPIGVNCIRSFPGRGIRVWGARTLSSDPAWRYLNIRRYFNYLEESILIGTQWVVFEPNDHNLWARIRRNVSAFLVNEWRNGALFGQSPDQAYYVKCDEETNPPESVDLGRVVCEIGIAPVKPAEFVIFRLAQFSSGGGELDE
Pvc16 N-terminal domain-containing protein 0A 225 Streptomyces Coelicolor A3(2) MIHEVDEVLKALLKGGALTDSGIDVAFEAPTRDWAARRNAPVVNAYLYDIREDVGRRHRGQVAVRDQDDIVVKRRQPPRWFRLSYLVTAWTKTPQDEHRLLSAVLATLLPREQLPPYELPGALGAMNLPVPMTVAGVQTESRSLAEIWSALGGELKPSLDLVVTAPFPAYPEYDAGPPVTEGATVRIGGVEGDPPMSEGRSHRPHQVAAARAARKAVTDGRTKRQ
Pvc16 N-terminal domain-containing protein 0F 225 Streptomyces Coelicolor A3(2) MIHEVDEVLKALLKGGALTDSGIDVAFEAPTRDWAARRNAPVVNAYLYDIREDVGRRHRGQVAVRDQDDIVVKRRQPPRWFRLSYLVTAWTKTPQDEHRLLSAVLATLLPREQLPPYELPGALGAMNLPVPMTVAGVQTESRSLAEIWSALGGELKPSLDLVVTAPFPAYPEYDAGPPVTEGATVRIGGVEGDPPMSEGRSHRPHQVAAARAARKAVTDGRTKRQ
Pvc16 N-terminal domain-containing protein 0E 225 Streptomyces Coelicolor A3(2) MIHEVDEVLKALLKGGALTDSGIDVAFEAPTRDWAARRNAPVVNAYLYDIREDVGRRHRGQVAVRDQDDIVVKRRQPPRWFRLSYLVTAWTKTPQDEHRLLSAVLATLLPREQLPPYELPGALGAMNLPVPMTVAGVQTESRSLAEIWSALGGELKPSLDLVVTAPFPAYPEYDAGPPVTEGATVRIGGVEGDPPMSEGRSHRPHQVAAARAARKAVTDGRTKRQ
Pvc16 N-terminal domain-containing protein 0D 225 Streptomyces Coelicolor A3(2) MIHEVDEVLKALLKGGALTDSGIDVAFEAPTRDWAARRNAPVVNAYLYDIREDVGRRHRGQVAVRDQDDIVVKRRQPPRWFRLSYLVTAWTKTPQDEHRLLSAVLATLLPREQLPPYELPGALGAMNLPVPMTVAGVQTESRSLAEIWSALGGELKPSLDLVVTAPFPAYPEYDAGPPVTEGATVRIGGVEGDPPMSEGRSHRPHQVAAARAARKAVTDGRTKRQ
Pvc16 N-terminal domain-containing protein 0C 225 Streptomyces Coelicolor A3(2) MIHEVDEVLKALLKGGALTDSGIDVAFEAPTRDWAARRNAPVVNAYLYDIREDVGRRHRGQVAVRDQDDIVVKRRQPPRWFRLSYLVTAWTKTPQDEHRLLSAVLATLLPREQLPPYELPGALGAMNLPVPMTVAGVQTESRSLAEIWSALGGELKPSLDLVVTAPFPAYPEYDAGPPVTEGATVRIGGVEGDPPMSEGRSHRPHQVAAARAARKAVTDGRTKRQ
Pvc16 N-terminal domain-containing protein 0B 225 Streptomyces Coelicolor A3(2) MIHEVDEVLKALLKGGALTDSGIDVAFEAPTRDWAARRNAPVVNAYLYDIREDVGRRHRGQVAVRDQDDIVVKRRQPPRWFRLSYLVTAWTKTPQDEHRLLSAVLATLLPREQLPPYELPGALGAMNLPVPMTVAGVQTESRSLAEIWSALGGELKPSLDLVVTAPFPAYPEYDAGPPVTEGATVRIGGVEGDPPMSEGRSHRPHQVAAARAARKAVTDGRTKRQ
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-09-18
Deposition Author(s): Afanasyev, P. , Casu, B. , Hass, P.E. , Pilhofer, M. , Sallmen, J.W. , Schlimpert, S. , Xu, J.