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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9G44

Structure of the minimal type i-f2 crispr-cas dna-interference complex.

PDB DOI: 10.2210/pdb9g44/pdb

Classification: ANTIVIRAL PROTEIN
Organism(s): Shewanella Putrefaciens Cn-32

Deposited: 2024-07-13
Deposition Author(s): Bange, G. , Innis, C.A. , Mais, C.N. , Paush, P. , Perry, T.N. , Randau, L. , Sanchez-Londono, M. , Steinchen, W.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.2 Å

9g44
Literature

Structure of the minimal type i-f2 crispr-cas dna-interference complex.

Bange, G. , Innis, C.A. , Mais, C.N. , Paush, P. , Perry, T.N. , Randau, L. , Sanchez-Londono, M. , Steinchen, W.

Primary Citation of Related Structures: 9G44


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated protein, Csy4 family C 169 Shewanella Putrefaciens Cn-32 MREAELSSKVFTKFHKALVTLNSHKIGISFPQMKLSLGQLFRIHGDASLLHDLQGLDWLGPLAGYCQVTAVSAVPDHVQYRIVSVKRSNLSKAKLKRLIARGSIDKDGEKRYKVKMLGQGFDNPYLDLFSSSTGQVYRKFFEFSDIQAHPLDGEFDSYGLSKTATVPWF
CRISPR-associated protein Cas7 F 322 Shewanella Putrefaciens Cn-32 MGHHHHHMQKVTGIKSVDFKIKALGHGVVNWNGPTTLTGDDGKTVDNHTLPKLRGYTNLTGKVKDETGYKYKKQATDINFKETPLYISQNCIRHHLFREQAFDLHYASDKNLKNVLASITGLIRGYVVPSSQCKRTSPLLLEDFVDQLGNGNFEQYGQAGARDSTSFFSKTTFGDTEYISYGSISIEQLQFISLDKKFDRAAMVIKEGEGEVIAAELQNYIQSLNPSLNPQAIFHSNYVRRGTIFEEGECGILLNDDAVKALVAETLERLANLSIRQAKGYMYVDDITVDYNDSHKMMRIKRDESEIINEQHAPFAQYFYAK
CRISPR-associated protein Cas7 G 322 Shewanella Putrefaciens Cn-32 MGHHHHHMQKVTGIKSVDFKIKALGHGVVNWNGPTTLTGDDGKTVDNHTLPKLRGYTNLTGKVKDETGYKYKKQATDINFKETPLYISQNCIRHHLFREQAFDLHYASDKNLKNVLASITGLIRGYVVPSSQCKRTSPLLLEDFVDQLGNGNFEQYGQAGARDSTSFFSKTTFGDTEYISYGSISIEQLQFISLDKKFDRAAMVIKEGEGEVIAAELQNYIQSLNPSLNPQAIFHSNYVRRGTIFEEGECGILLNDDAVKALVAETLERLANLSIRQAKGYMYVDDITVDYNDSHKMMRIKRDESEIINEQHAPFAQYFYAK
CRISPR-associated protein Cas7 H 322 Shewanella Putrefaciens Cn-32 MGHHHHHMQKVTGIKSVDFKIKALGHGVVNWNGPTTLTGDDGKTVDNHTLPKLRGYTNLTGKVKDETGYKYKKQATDINFKETPLYISQNCIRHHLFREQAFDLHYASDKNLKNVLASITGLIRGYVVPSSQCKRTSPLLLEDFVDQLGNGNFEQYGQAGARDSTSFFSKTTFGDTEYISYGSISIEQLQFISLDKKFDRAAMVIKEGEGEVIAAELQNYIQSLNPSLNPQAIFHSNYVRRGTIFEEGECGILLNDDAVKALVAETLERLANLSIRQAKGYMYVDDITVDYNDSHKMMRIKRDESEIINEQHAPFAQYFYAK
CRISPR-associated protein Cas7 I 322 Shewanella Putrefaciens Cn-32 MGHHHHHMQKVTGIKSVDFKIKALGHGVVNWNGPTTLTGDDGKTVDNHTLPKLRGYTNLTGKVKDETGYKYKKQATDINFKETPLYISQNCIRHHLFREQAFDLHYASDKNLKNVLASITGLIRGYVVPSSQCKRTSPLLLEDFVDQLGNGNFEQYGQAGARDSTSFFSKTTFGDTEYISYGSISIEQLQFISLDKKFDRAAMVIKEGEGEVIAAELQNYIQSLNPSLNPQAIFHSNYVRRGTIFEEGECGILLNDDAVKALVAETLERLANLSIRQAKGYMYVDDITVDYNDSHKMMRIKRDESEIINEQHAPFAQYFYAK
CRISPR-associated protein Cas7 D 322 Shewanella Putrefaciens Cn-32 MGHHHHHMQKVTGIKSVDFKIKALGHGVVNWNGPTTLTGDDGKTVDNHTLPKLRGYTNLTGKVKDETGYKYKKQATDINFKETPLYISQNCIRHHLFREQAFDLHYASDKNLKNVLASITGLIRGYVVPSSQCKRTSPLLLEDFVDQLGNGNFEQYGQAGARDSTSFFSKTTFGDTEYISYGSISIEQLQFISLDKKFDRAAMVIKEGEGEVIAAELQNYIQSLNPSLNPQAIFHSNYVRRGTIFEEGECGILLNDDAVKALVAETLERLANLSIRQAKGYMYVDDITVDYNDSHKMMRIKRDESEIINEQHAPFAQYFYAK
CRISPR-associated protein Cas7 E 322 Shewanella Putrefaciens Cn-32 MGHHHHHMQKVTGIKSVDFKIKALGHGVVNWNGPTTLTGDDGKTVDNHTLPKLRGYTNLTGKVKDETGYKYKKQATDINFKETPLYISQNCIRHHLFREQAFDLHYASDKNLKNVLASITGLIRGYVVPSSQCKRTSPLLLEDFVDQLGNGNFEQYGQAGARDSTSFFSKTTFGDTEYISYGSISIEQLQFISLDKKFDRAAMVIKEGEGEVIAAELQNYIQSLNPSLNPQAIFHSNYVRRGTIFEEGECGILLNDDAVKALVAETLERLANLSIRQAKGYMYVDDITVDYNDSHKMMRIKRDESEIINEQHAPFAQYFYAK
Cas5fv helical domain-containing protein B 336 Shewanella Putrefaciens Cn-32 MKIIIEYDSCWRNAFLGGSNNEPVPKKGREFLGSMTSLKKEGNFKVCENTLDTVMGVLNRLIGDQRKLYQARSKMYESAYYFEALEDKVSFIDKPQLTNEISFIRNMNGSTDQNAFTGMIKVSDPVFTSEYSQQFWGVLALDFTQLCDFIIKQSQVVGSIELNPLSIINRLESLNQEKALENSDDLAQVLKVLNEYFPDIEYLNNKGLITPISIYCSALYLQLARLETSFNMTTAKTKAGGISGISKRGFTKKDFMDRYTTGPKKTIWGNPFIKKEKIKGQGEVTSMMTKASGQLEISIDVDRDKAQEIKILIENAGVSSFYLGKKGLAYVSNIKL
DEAD-like helicases-like protein A 882 Shewanella Putrefaciens Cn-32 MGHHHHHHKPKQGVLYANTQLQPLSEHLFAVGFVAELLHRQLFPENTQFSIANFIAGCLHDLGKIQPKFQEWVTNPKKRDFIAEDGQHIDDAKFSFDKHPRHNEVSLLLYQLLDSTELKLLNPSNKRSVKHALYWHHAKPFRKEKNGFDTYKDISKKLVANQKEIGLSDIVGQAQTLLRQVIGIDKKYRELTNRLLEKAFLAEVEQDLEANLPDAPALPSYKEYEFEESVSANSTNVKLNALNNIVRACLISADRTVSALSAAELHTAIFERQLEEIVTELLEVETTLSSDIDTCLNAFFPTSERSQKQRDIAKQLTTAEDVAVLAGAAGCGKTKIALEWAKLQGVKRIIWVCPRVQVCQGLFYELTSEQYLPNSTIEINTGEFKFHNQWDNPIPDDENFSGDIVLTTIDQILGSVISHTKANTLIDFLNVHVVFDEFHEYVNMPAFNLLFAELIAAKKMQKDQAKTLLVSATPHYVFVEDLLGIHPDDIKIMPSFNPSQYQLDFKIFDDTNLSNINPLFAQQSGCTFVISNMALTAQNSFIVNQHNENAVLLHSKFIKSDKRKWFGEVYEAYKRDGTRKYEVLRSGPIVQASLNISCDYMVAEITSAEDCLQRLGRLDRFGENSDVNTYTLAVPESIANGKGKSPAAGFLSKMYALSSVRAWYQFLHSELADKTFTLPEIYQLYFAFHHTERNRGFIASDLVAALKNSVQQINAKVVDPITVPPKNNKDKKRTKISKGSLRGDNRFVQLAVVDLSQAEPKYIEAYAYSIPLDDDSNIDNLTYATKAICGYDQSDKDLLSHMFKKHHNIMGGTGKAFTDKILLNEARDPESPIYLSYTTNDLLQVGGESARHPHAIYYAVCDKQAIGAMSIKQINQTTEDEE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (61-MER) j 61 NA CUUAGAAAUAUCGCCCAGCAAGACGCGCAAACCUAUAACCGUUCACCGCCGCACAGGCGGC
DNA (39-MER) k 57 NA CCCACGTGCCACCATCATTATTATTGTTATTATTCTTAGTATTATTCCCCTCCTCGC
DNA (41-MER) l 57 NA GCGAGGAGGGGAGGTTATAGGTTTGCGCGTCTTGCTGGGCGATAGGTGGCACGTGGG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-07-13
Deposition Author(s): Bange, G. , Innis, C.A. , Mais, C.N. , Paush, P. , Perry, T.N. , Randau, L. , Sanchez-Londono, M. , Steinchen, W.