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FASTA Sequence PDB Format mmCIF Format
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9EVT

Structure of the small subunit of the flowering plant mitoribosome with the maturation factor rsga

PDB DOI: 10.2210/pdb9evt/pdb

Classification: RIBOSOME
Organism(s): Brassica Oleracea Var. Botrytis

Deposited: 2024-04-02
Deposition Author(s): Giege, P. , Skaltsogiannis, V. , Waltz, F.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.27 Å

9evt
Literature

Structure of the small subunit of the flowering plant mitoribosome with the maturation factor rsga

Giege, P. , Skaltsogiannis, V. , Waltz, F.

Primary Citation of Related Structures: 9EVT


Proteins
Molecule Chains Sequence Length Organism Sequence
Small ribosomal subunit protein mS35 mitochondrial conserved domain-containing protein A 424 Brassica Oleracea Var. Botrytis MRGALFRNASLCARRLLLSPRINTHQPSSSSNARFVAPIATPFPPRLFSSESDSSGENPPPPPESSSPIESSNKKDLAVEDVGNKELKARIEKYFNEGNEDALPGIIEALLQRRLADKHADTDDEVMDSLQNQPFKDDVKDEDFESDFEEAHSTDDELEDLYNSPEYVKKKMQNNEFFNMDEKKWDVIVRDGIRHGILKDTKECEEILEDMLHWDKLLPDDLKKKVEAKFNELGDMCERGEIEPEAAYELFKEFEDEMVIQYGDQMEAAGPPKFDETDPSYSNTNLDDPPGKGPILRWQSRIVFAPGGDAWHPKNRKVKLSVTVKELGLSKHQARRLRELVGKRYDSGKDELTITSERFEHREENRKDCLRTLYGLIEEAAKANKIAEDIRTAYVKQRLQANPAFMQKLQAKIMRSKESNPINA
Ribosomal protein S11 J 304 Brassica Oleracea Var. Botrytis MNGVSRHLRASSLPSLIRSYGGIKSVCRFSCQSDGSSGGRFGEQGRVPGDSENKSGLPDPNASPSKSFSEMRSGLLNKIGDGGYSAPNAPPTFRNPLRSRLPNTLPSQSGQMNQEGLPNTGGTGFSAPSYQSFTQSNLLKDNFRTGGISKDLDFVRGVIEDDEGRRATGLFSHFHRPNLETNADIIHIKLLRNNTFVTVTDSKGNVKCKATSGSLPDLKGGRKMTSYTADATAENIGRRVKAMGLKSVVVKVNGFTHFKKKRNAIVAFRSGYSNSRNDQNPIVYIEDTTRKAHNGCRLPRKRRV
RRM domain-containing protein K 153 Brassica Oleracea Var. Botrytis MHYMGLFSRAGNIFKQPRAMQAANAMLQGNLSLTPSKLFVGGLSPTTDVDILKEVFGKFGKIVDVVVVSDRETGVSKGFGFVTYDSIDAANKAMQQMNDQELDGRIIGVNPADSGGGGGGFARRGGYGGGRGGFGRGGFGRGGFGRGGYNFVR
uS13m L 154 Brassica Oleracea Var. Botrytis MLGLRRSAATLFDHSQSLLRNLSFHGLRVQGIRVGNAEVPNHKPLKTGLQEVYGIGRRKSHQVLCGLGITNKLARDLTGKELIDLREEVGMHQHGDELRRRVGSEIQRLVEVDCYRGSRHRHGMPCRGQRTKTNARTKKGKRVAIAGKKKAPRK
Small ribosomal subunit protein uS14m M 155 Brassica Oleracea Var. Botrytis MANLRGVLTNVSSYCQRSFSQSALLWRSAVKPPNNLAQIQSRQISTSLAKHSGTEQGVKRNSADHRRRLLAARFELRRKLYKAFCKDPELPSEMREKNRYKLSKLPRNSAFTRIRNRCVFTGRSRSVTELFRMSRICFRGLANKGELVGIKKSSW
Small ribosomal subunit protein uS15c N 414 Brassica Oleracea Var. Botrytis MAFHLARRKQRLHSNPYLIHLFSTSSSSASPQDGNESGEQQPSQSPSDFKISSYFSGIKSSLKQQPQHQAQDGRRQLAGFDPKAPSFSGSGGDFQDVRRNLNEFRRRAAAPPARDLQDLYKQNVLSKSGDLGAGKVEGSPFENLKKNLRQMRPQETRWSNLSSLQSIMKAKDSGNVRSNVFGGGEGLPISVFGEEIEERKKMGDDSEEMKSEFIKSYNTKELGEILRQYRPEGKREEGWFSLQELNQRLVKLREVEEAAAQGARKGIAFDDLRSEIQQARKSQAFQNLDFFSVLNGTPKYLLEPPKDELVQTYFHPDNMSSAEKMKIELAKVREEFKMSESDCGSARVQVAQLTTKIKHLSSVLHKKDKHSKKGLIAMVHRRKKLLKYMRRTDWDSYCLSLSKLGLRDNPDYKF
30S ribosomal protein S16 O 136 Brassica Oleracea Var. Botrytis MVVRLRLSRLGCKNRPFFRVMATDSRSPRDGKHIEVLGYFNPLPGQDGGKRMGLKFDRIKYWLSVGAQASDPVQRLLFRSGLLPPPPMVAMGRKGGERDTRPVDPMTGRFVDAEKKTPVIIDNQPKEEDNAQDKSP
Small ribosomal subunit protein uS17c P 110 Brassica Oleracea Var. Botrytis MKPVIGTVVSNKMQKSVVVAVDRLFHNKLYNRYVKRTSKFMAHDETNACNIGDRVKLDPSRPLSKHKNWIVAEIIKKARIYSPQAAAAAALSFSAAKSPSESSVPPVSSS
Small ribosomal subunit protein bS18c Q 237 Brassica Oleracea Var. Botrytis MKLAHSAIRSLSDVASFQTCRPFVSRSLSTNANQDDWMFGGKDEKANSFFQHLGKAEKDKRDYTGFSRSQGNGSRFDPSSDGVDGKLKEAALIYNVDDDEGVKDGYSFRPDVNSWGVNQFPRDMNFRRQMQRPRQNNKAEITTEEVLKKADFRNVRFLAQFITEAGILVKRKQTGISAKAQRKIAREIKTARAFGLMPFTTMGTKAFTFGKTMENRDQDFEYEVIDDDDEYDDNTPE
Small ribosomal subunit protein uS19m R 212 Brassica Oleracea Var. Botrytis MAFCTKLGGHWKQGVNVPVSSMLGSLRYMSTKLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAKDWPSLPLSLDESIEEAEKKENKMMSRSVWKDPFVDAFLMKKKNAALNRKIWSRRSTILPEYVDSAVRIYNGKTHVRCKITEGKVGHKFGEFAFTRKVKKHAKAK
Ribosomal protein S21 S 100 Brassica Oleracea Var. Botrytis MNTIAKRVTGLLTRPSHSQLQQERGIRVKVFSGDLDKALTILQRKMQSSGMERLIKAQQTHHIKNSEKKVLARKNLERKIKSIDFARKLQSILIKKVRGL
IMS import disulfide relay-system CHCH-CHCH-like Cx9C domain-containing protein B 80 Brassica Oleracea Var. Botrytis MGRKAGNLYINPKKLGNLAKPCMKEMVSFLNCMALNNIKDDKCEKQKQLLSVCMQGQSDHKNKSWGNINYHLQRLTRGRK
30S ribosomal protein S31, mitochondrial T 94 Brassica Oleracea Var. Botrytis MMAAAQWCSSMTRLVMMMQRTSPALACSARYSSLCPAAASMEVCGRGDSKTKKGKRFKGSYGNSRGKKQKMIERIKDKLELPRSTPWPLPFKLI
Small ribosomal subunit protein mS23 U 192 Brassica Oleracea Var. Botrytis MSWMKGDLLSKTRRLVGGLATREPVWLKAMEASPPPVFPRSNGNLKKIVLPEDPYVRRFARKHPEAKLVEPNKVSAFIPDQARVYGCRVLELTKNGISEDDAMSVANMEYLAERKEKKKAYKRLKELAVLQDKAPPPKPYLSTKKEMQTQEKKPPTDPPSVRRLVNQLKQQKDVLLQDKPGGSANQDHWIDE
mS26 V 193 Brassica Oleracea Var. Botrytis MSLCNQLSRLVKQSPLTKQSLRSFSAEAATHHRHHQETHSFLEPESYIGSWEAPKDPKDAERMLAQLRRDYAKKVSLYRKDYVHEIEMLRVEKQRKDEARLVAERAANEERRRLKAEAAKVRAEERKIFQDEFRKTLMKERAEKLEFWRMTGLKREEKKKARKKLLHEQSSLWIEPKELEKKITEALVDSTTL
Small ribosomal subunit protein mS29 W 483 Brassica Oleracea Var. Botrytis MFRSVVRITSRNFNLNRRSLIPNDAVSHFPSPPSASAATLIPSLDHAHRRRFSSSKSTKSSITKTKKSEGKKSKSKGGESGAAAGAEDGEFGGSAGDDLEAGRAKRLADDEKTPSLDVGPNGRPLFTPRDVTLSKLSQKDIGSYFNFDEAALKAVLPEGLASGIEDEFKESWRPALLVRKSFLDLRDNFRRIADPPMWPSEGKGGVKPKKQIILDGPVKSGKSIALAMLVHWARDEGWLVLYAPKGRDWTHGGYFYKNQHTGFWDTPLQAESILKDFVKFNEPRLRELRCNVYDPIVLGEGAGVGYLKGQETMPIPEDSTLYDLVQMGINSTHAAVSVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEFEEPVTPRSCRPIHARELTTVNAFRSMMHDDMMVGAFSHSTAVGKLRKDLPDVPADARQNFPRYSLDEAEAVCYYYLRQRLVRREVFSEENWKKIYYLANGNGAEMRWLVPFMR
BnaC06g06470D protein X 496 Brassica Oleracea Var. Botrytis MRGAIGRRLSNPSNGFSLASIVKHTPFLVQPTSHFSSSSSDGGAVRGRGRGRGGSGSPAAGAGQFGFNREPEKANEPVGQARGSSESQSPGGYGHGRGRPIQSDPISPPFSSFVKPDSHSVGRGRGSLRSDPVSPFSPEPPRHPAPPQPQQPRFEPAKDGVQGSPPFAKLEATKDATSPPPPPPPGAPNNISNALGSGAGRGKPFVQNEDNRHIQRSPQPLQRQKRVQPPKDTTPRPQLSPEEAGRRARSQLSRGEAEGGSGGGVRGRGGGRGRGRGARGRGRGRGGEGWRDDKKEEEAEQEALSVFVGDNADGEKFAKKMGDEIMAKLAEGYEDICERALPSTAHDALVDAYDTNLMIECEPEYLMPDFGSNPDIDEKPPMPLRECLEKVKPFIVALEGIKDQEEWEEAIGEAMAEAPRMKEIVDHYSGPDRVTAKKQNEELDRIATTVPQSAPDSVKRFADRVALSLKSNPGWGFDKKYQFMDKLVLEVSQNYK
MOSC domain-containing protein Y 102 Brassica Oleracea Var. Botrytis MASGSLKNLVTSAVTVGVTEARARIFGHMLNPTGQRSPHKILRKKLFGDKVAEWYPYDIKNEDPNVLAREEKERLSKLEMLKRRNKGPPQKGHGRRAAKRNK
Mitochondrial 28S ribosomal protein S34 Z 153 Brassica Oleracea Var. Botrytis MAATLMNRAISRTETVGAFRLSLNLLRNFSAPAAAAAASPSTENPSSDSIKPKRRKKKNLIEVAQFLPNWGIGYHMAKAHWNGVSYEITKINLYKDGRHGKAWGIVHKDGLRAAEAPKKISGVHKRCWKYIPNLSKTTPATTGSAPAAEVQAA
EngC GTPase domain-containing protein 7 496 Brassica Oleracea Var. Botrytis MQISSLSIIRHSSPFLLRRASIHHGGCGVRLGTGIGIRRSFHLLTLSARRDNPDVSRKPHPSKNMLRAKHIGKDHSSLAPVLSPDHNPSLLPSQAIGTVATAQANFMRVVVQDGDGDGDDRSSSTSSSKDGVELLCVVRAVLKKIRRRVLVGDKVLVGSIDWVDRRGMIENVFQRRSEILDPPVANVDHLLVLFSLDQPKLEPFTLTRFLVEAESTGIPLTLALNKCELITEEELESWKMRLRGWNYEPFFCSVGTKEGLDAIAFVLRNQTSVIVGPSGVGKSSLINILRSSSGGGDVEDENWFEPIIGNKWFEDQRVGEVSTRSGRGKHTTRNVSLLPITEGGYLADTPGFNQPSLLKVTKHSLALCFPEIRKMIEEEKCGFKDCLHIGEPGCVVKGEWERYPYYLQLLDEIRVREEFQLRTFGTKREGDVRYKVGGMGVKQAEPRLMPKKHRRESRKKVKQTMISELDEYEDEESDLDIEDDPIVQAIENEKER
Small ribosomal subunit protein mS38 C 128 Brassica Oleracea Var. Botrytis MANLMQRFIRNQSCLRAIPKLTPNLIPHQKPCIIINNNVESPFPLTNPVIAFSGSGIKPDEALRFYPSFPIGYGLNPSVVHGSGLTDTVVEEKEKEVVIHADSVKKKRKKKMNKHKYRKLRKKQGRKS
S5 DRBM domain-containing protein D 501 Brassica Oleracea Var. Botrytis MSFRTRASSWTRLLLRRNPRSSFSRQISSLDASGSAFPGRITPWISSQTHRFSSATTISPAEADRVVRDLLAEVEKEKQREREERQRQGLDCKDIDDEDEDEEDYLGIEPFIEKLKKQNLKDDGELNRREESSDSDSELDEVDWDEERKKEDMFNKKFQRHKELLQTLTKSETLDEAYKWMTKLDKFEEKHFKLAPEYRVIGELMNRLKVAEGKDKFILQQKINRAMRLVEWKEAFDPNNPANYGVIERDNVQGGEEKEERLVADGSKDDNDDNEEEFDDMKERDDILLEKLNAIDKKLESKLSELDHTFGKKGKRLEEEIRDLAEERNALTEKKRQPLYRKGYDVHVIDVKKVAKVTKGGRVERYTALMVCGNYEGVIGYAKAKAETGQSAMQKAYEKCFQNLHYIERHEEHTIAHAIQTSYKKTKLYLWPAPTTTGMKAGRVVKTMLLLAGFKNIKSKVIGSRNSYNTVKAVLKALNAVETPKDVQEKFGRTVVEKYLL
bS6m E 138 Brassica Oleracea Var. Botrytis MPLYDCMLLFKPIIRKEGLIDLVARIGKHVYSKNGVLTEVKSFGKVELGYGIKKLDGRHYQGQLMQITMMATPNINKELHYLNKDDKLLRWLLVKHRDIKIGSSEMEDRQDDSNRVTNRSLYDESSTDEDDDILGLSR
uS7m,Small ribosomal subunit protein uS7m,Small ribosomal subunit protein uS7m F 157 Brassica Oleracea Var. Botrytis XXXXXXXXXXGGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPICEVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQKRGSARRKRENLHGLASTNRSFAHFRWW
30S ribosomal protein S9 H 383 Brassica Oleracea Var. Botrytis MLSRLFLRSSNLRLATLVSSKSNSQIFSSFIRPLSTNSSGGGGGNDSGNGGNRNDAPWSFSGVNDGKSDPFSSFESGSPGGDGKWPKEEPKRWNMKEEGDEKAVFGDVSNGFGDVKSSGWDVSSKPWDLKEDEEDGKVVFDTSGEMPVSFDNSLVNEEEERAKKELFEKEEKELTEVIKGPDRAFGDLIAKSGITDEMLDSLIALKDFQGVQGLPPLTEIENLRREKSSKKSSRAEIELQMQEEIAKARVRQVDEAGRAYGTGRRKCSIARVWIVPGKGKFLVNDKEFDVYFPMLDHRAALLRPLAETKTLGSWDINCTVTGGGTTGQVGAIQLGISRALQNWEPDMRTALRAAGFLTRDSRVVERKKPGKAKARKSFQWVKR
Small ribosomal subunit protein uS10 domain-containing protein I 228 Brassica Oleracea Var. Botrytis MIGVLRRSSLPSRHALSAALTSFDSGLSLNITSAATGASVKLNLVGNGSTLSSASFVISARDFHIRSEPSMVSPAKISFRGYATGSESSIGDSAKIKISPENVKPLSKKKKGGGESTSKIKGTRICIAIRSFDNPEKEAWCLPPHSRYAAMPDTRTLYTVLRSPHVDKKSREQFEMRFKKRFLVIKAQSHELSNKLFWLKRYRILGAQYELQFHCKTRLDMSPVLGSK
40S ribosomal protein S15a G 129 Brassica Oleracea Var. Botrytis MGRRILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVHDPHRVGRITVDLQGRVNDCKALTYRQDVKAKEIEEYTERTLPTRQWGYVVVTTPDGILDHEEAIKRNVGGQVLGFFY

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
18S rRNA 2 1560 NA CAUAGUCAAAAGAAGAGUUUGAUUCUGGCUCAGAAGGAACGCUAGCUAUAUGCUUAACACAUGCAAGUCGAACGUUGUUCUAAAAAAAAAAUUUUUUUUAAGAGUUGAGAACAAAGUGGCGAACGGGUGAGUAAGGCGUGGGAAUCUGCCGAACAGUUCGGGCUAAAUCCCGAAGAAAGCUAGAAAGCGCUGUUUGAUGAGCCUGCGUAGUAUUAGGUAGUUGGUUAGGUAAAGGCUGACCAAGCCGAUGAUGCUUAGCUGGUCUUUUCGGACGAUCAGCCACACCGGGACUGAGACACGGCCCGGACUCCCACGGGGGGCAGCAGUGGGGAAUCUUGGACAAUGGGCGCAAGCCUGAUCCAGCAAUAUUGCGUGAGUGAAGAAGGGCAAUUCCGCUCGUAAAGCUCUUUCGUCGAGUGCGCGAUCAUGACAUGACUCGAGGAAGAAGCCCCGGCUAACUCCGUGCCAGCAGCCGCGGUAAAACGGGGGGGGCAAGUGUUCUUCGGAAUGACUAGGCGUAAAGGGCACGUAGGCGGUUCAUCGGGUUGAAAGUGAAAGUCGUCAAAAAGUGGCGGAAUGCUUUCGAAACCACUGAACUUGAGUGAGACAGAGGAGAGUGGAAUUUCGUGUGGAGGGGUGAAAUCUACGGAUCUACGAAGGAACGCCAAAAGCGAAGGCAGCUCUCUGGGUCUCUACCGACGCUGGUGUGCGAAAGCAUGGGGAGCGAACGGGAUUAGAUACCCUGGUAGUCCAUGCCGUAAACGAUGAGUGUUCGCCCUUGGUCUAUUCUGAUCUGGGGCUCAGCUAACGCGUUAAACACUCCGCCUGGGGAGUACGGUCGCAAGACCAAAACUCAAAGGAAUUGACGGGGGCCUGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUACAACGCGCAGAACCUUACCAGCCCUUGACAUAUGAACGAGAAACCCUAUCCUUAACGGGAUGGUACUGACUUUCAUACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUUGGUUAAGUCCUAUAACGAGCGAAACCCUCGCCUUGUGUUGCUCAGACAUGCGCCUAAGGAGAACUCCGAAACAAACAAAAAGGUGCGUGACGCACUCACGAGGGACUGCCAGUGAUAUACUGGAGGAAGGUGGGGAUGACGUCAAGUCCGCAUGGCCCUUAUGGGCUGGGCCACACACGUGCUACAAUGGCAAUUACAAUGGGAAGCAAGGCUGUAAGGCGGAGCGAAUCCGGAAAGAUUGCCUCAGUUCGGAUUGUUCUCUGCAACUCGGGAACAUGAAGUUGGAAUCGCUAGUAAUCGCGGAUCAGCAUGCCGCGGUGAAUAUGUACCCGGGCCCUGUACACACCGCCCGUCACACCCUGGGAAUUGGUUUCGCCCGAAGCAUCGGACCAAUGAUCACCCAGCACUUCUGUGUAACACUAGUCACACAAAGACUUUUGGUGGUCUUAUUGACGCAUACCACGGUGGGGUCUUCGACUGGGGUGAAGUCGUAACAAGGUAGCCGUAGGGGAACCUGUGGCUGGAUUAUCC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-04-02
Deposition Author(s): Giege, P. , Skaltsogiannis, V. , Waltz, F.