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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9E7L

Yeast v-atpase vo proton channel bound to nanobody 2wva7

PDB DOI: 10.2210/pdb9e7l/pdb

Classification: PROTON TRANSPORT
Organism(s): Klebsiella Phage Phiko2 , Grouper Iridovirus

Deposited: 2024-11-02
Deposition Author(s): Knight, K. , Park, J.B. , Roh, S.-H. , Wilkens, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.33 Å

9e7l
Literature

Yeast v-atpase vo proton channel bound to nanobody 2wva7

Knight, K. , Park, J.B. , Roh, S.-H. , Wilkens, S.

Primary Citation of Related Structures: 9E7L


Proteins
Molecule Chains Sequence Length Organism Sequence
V-type proton ATPase subunit d B 345 Klebsiella Phage Phiko2 , Grouper Iridovirus MEGVYFNIDNGFIEGVVRGYRNGLLSNNQYINLTQCDTLEDLKLQLSSTDYGNFLSSVSSESLTTSLIQEYASSKLYHEFNYIRDQSSGSTRKFMDYITYGYMIDNVALMITGTIHDRDKGEILQRCHPLGWFDTLPTLSVATDLESLYETVLVDTPLAPYFKNCFDTAEELDDMNIEIIRNKLYKAYLEDFYNFVTEEIPEPAKECMQTLLGFEADRRSINIALNSLQSSDIDPDLKSDLLPNIGKLYPLATFHLAQAQDFEGVRAALANVYEYRGFLETGNLEDHFYQLEMELCRDAFTQQFAISTVWAWMKSKEQEVRNITWIAECIAQNQRERINNYISVY
V-type proton ATPase subunit c'' C 213 Klebsiella Phage Phiko2 , Grouper Iridovirus MNKESKDDDMSLGKFSFSHFLYYLVLIVVIVYGLYKLFTGHGSDINFGKFLLRTSPYMWANLGIALCVGLSVVGAAWGIFITGSSMIGAGVRAPRITTKNLISIIFCEVVAIYGLIIAIVFSSKLTVATAENMYSKSNLYTGYSLFWAGITVGASNLICGIAVGITGATAAISDAADSALFVKILVIEIFGSILGLLGLIVGLLMAGKASEFQ
V-type proton ATPase subunit c' D 164 Klebsiella Phage Phiko2 , Grouper Iridovirus MSTQLASNIYAPLYAPFFGFAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVVAVLIAGNLSPTEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIVALILNTRGSE
Nanobody 2WVA7 X 136 Klebsiella Phage Phiko2 , Grouper Iridovirus QVQLQESGGGLVEIGGSLRLSCAASGTLFTFNTMAWYRQAPGKQREFIATITSGGNTNYADSVQGRFTISRGNAKNTLYLQMNSLKPEDTAVYYCNARTMTGPFDYWGQGTQVTVSSAAAYPYDVPDYGSHHHHHH
Nanobody 2WVA7 W 136 Klebsiella Phage Phiko2 , Grouper Iridovirus QVQLQESGGGLVEIGGSLRLSCAASGTLFTFNTMAWYRQAPGKQREFIATITSGGNTNYADSVQGRFTISRGNAKNTLYLQMNSLKPEDTAVYYCNARTMTGPFDYWGQGTQVTVSSAAAYPYDVPDYGSHHHHHH
Nanobody 2WVA7 V 136 Klebsiella Phage Phiko2 , Grouper Iridovirus QVQLQESGGGLVEIGGSLRLSCAASGTLFTFNTMAWYRQAPGKQREFIATITSGGNTNYADSVQGRFTISRGNAKNTLYLQMNSLKPEDTAVYYCNARTMTGPFDYWGQGTQVTVSSAAAYPYDVPDYGSHHHHHH
Nanobody 2WVA7 U 136 Klebsiella Phage Phiko2 , Grouper Iridovirus QVQLQESGGGLVEIGGSLRLSCAASGTLFTFNTMAWYRQAPGKQREFIATITSGGNTNYADSVQGRFTISRGNAKNTLYLQMNSLKPEDTAVYYCNARTMTGPFDYWGQGTQVTVSSAAAYPYDVPDYGSHHHHHH
Nanobody 2WVA7 T 136 Klebsiella Phage Phiko2 , Grouper Iridovirus QVQLQESGGGLVEIGGSLRLSCAASGTLFTFNTMAWYRQAPGKQREFIATITSGGNTNYADSVQGRFTISRGNAKNTLYLQMNSLKPEDTAVYYCNARTMTGPFDYWGQGTQVTVSSAAAYPYDVPDYGSHHHHHH
Nanobody 2WVA7 S 136 Klebsiella Phage Phiko2 , Grouper Iridovirus QVQLQESGGGLVEIGGSLRLSCAASGTLFTFNTMAWYRQAPGKQREFIATITSGGNTNYADSVQGRFTISRGNAKNTLYLQMNSLKPEDTAVYYCNARTMTGPFDYWGQGTQVTVSSAAAYPYDVPDYGSHHHHHH
Nanobody 2WVA7 R 136 Klebsiella Phage Phiko2 , Grouper Iridovirus QVQLQESGGGLVEIGGSLRLSCAASGTLFTFNTMAWYRQAPGKQREFIATITSGGNTNYADSVQGRFTISRGNAKNTLYLQMNSLKPEDTAVYYCNARTMTGPFDYWGQGTQVTVSSAAAYPYDVPDYGSHHHHHH
Nanobody 2WVA7 Q 136 Klebsiella Phage Phiko2 , Grouper Iridovirus QVQLQESGGGLVEIGGSLRLSCAASGTLFTFNTMAWYRQAPGKQREFIATITSGGNTNYADSVQGRFTISRGNAKNTLYLQMNSLKPEDTAVYYCNARTMTGPFDYWGQGTQVTVSSAAAYPYDVPDYGSHHHHHH
V-type proton ATPase subunit c F 160 Klebsiella Phage Phiko2 , Grouper Iridovirus MTELCPVYAPFFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQKQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRATQDVVC
V-type proton ATPase subunit c G 160 Klebsiella Phage Phiko2 , Grouper Iridovirus MTELCPVYAPFFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQKQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRATQDVVC
V-type proton ATPase subunit c H 160 Klebsiella Phage Phiko2 , Grouper Iridovirus MTELCPVYAPFFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQKQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRATQDVVC
V-type proton ATPase subunit c I 160 Klebsiella Phage Phiko2 , Grouper Iridovirus MTELCPVYAPFFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQKQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRATQDVVC
V-type proton ATPase subunit c J 160 Klebsiella Phage Phiko2 , Grouper Iridovirus MTELCPVYAPFFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQKQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRATQDVVC
V-type proton ATPase subunit c K 160 Klebsiella Phage Phiko2 , Grouper Iridovirus MTELCPVYAPFFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQKQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRATQDVVC
V-type proton ATPase subunit c L 160 Klebsiella Phage Phiko2 , Grouper Iridovirus MTELCPVYAPFFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQKQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRATQDVVC
V-type proton ATPase subunit c E 160 Klebsiella Phage Phiko2 , Grouper Iridovirus MTELCPVYAPFFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQKQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRATQDVVC
V-type proton ATPase subunit e M 73 Klebsiella Phage Phiko2 , Grouper Iridovirus MSSFYTVVGVFIVVSAMSVLFWIMAPKNNQAVWRSTVILTLAMMFLMWAITFLCQLHPLVAPRRSDLRPEFAE
V0 assembly protein 1 N 265 Klebsiella Phage Phiko2 , Grouper Iridovirus MVFGQLYALFIFTLSCCISKTVQADSSKESSSFISFDKESNWDTISTISSTADVISSVDSAIAVFEFDNFSLLDNLMIDEEYPFFNRFFANDVSLTVHDDSPLNISQSLSPIMEQFTVDELPESASDLLYEYSLDDKSIVLFKFTSDAYDLKKLDEFIDSCLSFLEDKSGDNLTVVINSLGWAFEDEDGDDEYATEETLSHHDNNKGKEGDDDILSSIWTEGLLMCLIVSALLLFILIVALSWISNLDITYGALEKSTNPIKKNN
Yeast V-ATPase subunit f O 85 Klebsiella Phage Phiko2 , Grouper Iridovirus MRPVVSTGKAWCCTVLSAFGVVILSVIAHLFNTNHESFVGSINDPEDGPAVAHTVYLAALVYLVFFVFCGFQVYLARRKPSIELR
V-type proton ATPase subunit a, vacuolar isoform A 840 Klebsiella Phage Phiko2 , Grouper Iridovirus MAEKEEAIFRSAEMALVQFYIPQEISRDSAYTLGQLGLVQFRDLNSKVRAFQRTFVNEIRRLDNVERQYRYFYSLLKKHDIKLYEGDTDKYLDGSGELYVPPSGSVIDDYVRNASYLEERLIQMEDATDQIEVQKNDLEQYRFILQSGDEFFLKGDNTDSTSYMDEDMIDANGENIAAAIGASVNYVTGVIARDKVATLEQILWRVLRGNLFFKTVEIEQPVYDVKTREYKHKNAFIVFSHGDLIIKRIRKIAESLDANLYDVDSSNEGRSQQLAKVNKNLSDLYTVLKTTSTTLESELYAIAKELDSWFQDVTREKAIFEILNKSNYDTNRKILIAEGWIPRDELATLQARLGEMIARLGIDVPSIIQVLDTNHTPPTFHRTNKFTAGFQSICDCYGIAQYREINAGLPTIVTFPFMFAIMFGDMGHGFLMTLAALSLVLNEKKINKMKRGEIFDMAFTGRYIILLMGVFSMYTGFLYNDIFSKTMTIFKSGWKWPDHWKKGESITATSVGTYPIGLDWAWHGTENALLFSNSYKMKLSILMGFIHMTYSYFFSLANHLYFNSMIDIIGNFIPGLLFMQGIFGYLSVCIVYKWAVDWVKDGKPAPGLLNMLINMFLSPGTIDDELYPHQAKVQVFLLLMALVCIPWLLLVKPLHFKFTHKKKSHEPLPSTEADASSEDLEAQQLISAMDADDAEEEEVGSGSHGEDFGDIMIHQVIHTIEFCLNCVSHTASYLRLWALSLAHAQLSSVLWTMTIQIAFGFRGFVGVFMTVALFAMWFALTCAVLVLMEGTSAMLHSLRLHWVESMSKFFVGEGLPYEPFAFEYKDMEVAVASASSSASS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-11-02
Deposition Author(s): Knight, K. , Park, J.B. , Roh, S.-H. , Wilkens, S.