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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9E76

Yeast v-atpase vo proton channel bound to nanobody 1wva25

PDB DOI: 10.2210/pdb9e76/pdb

Classification: PROTON TRANSPORT
Organism(s): Lama Glama , Saccharomyces Cerevisiae

Deposited: 2024-10-31
Deposition Author(s): Knight, K. , Wilkens, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.4 Å

9e76
Literature

Yeast v-atpase vo proton channel bound to nanobody 1wva25

Knight, K. , Wilkens, S.

Primary Citation of Related Structures: 9E76


Proteins
Molecule Chains Sequence Length Organism Sequence
V-type proton ATPase subunit d B 345 Lama Glama , Saccharomyces Cerevisiae MEGVYFNIDNGFIEGVVRGYRNGLLSNNQYINLTQCDTLEDLKLQLSSTDYGNFLSSVSSESLTTSLIQEYASSKLYHEFNYIRDQSSGSTRKFMDYITYGYMIDNVALMITGTIHDRDKGEILQRCHPLGWFDTLPTLSVATDLESLYETVLVDTPLAPYFKNCFDTAEELDDMNIEIIRNKLYKAYLEDFYNFVTEEIPEPAKECMQTLLGFEADRRSINIALNSLQSSDIDPDLKSDLLPNIGKLYPLATFHLAQAQDFEGVRAALANVYEYRGFLETGNLEDHFYQLEMELCRDAFTQQFAISTVWAWMKSKEQEVRNITWIAECIAQNQRERINNYISVY
V-type proton ATPase subunit c'' C 213 Lama Glama , Saccharomyces Cerevisiae MNKESKDDDMSLGKFSFSHFLYYLVLIVVIVYGLYKLFTGHGSDINFGKFLLRTSPYMWANLGIALCVGLSVVGAAWGIFITGSSMIGAGVRAPRITTKNLISIIFCEVVAIYGLIIAIVFSSKLTVATAENMYSKSNLYTGYSLFWAGITVGASNLICGIAVGITGATAAISDAADSALFVKILVIEIFGSILGLLGLIVGLLMAGKASEFQ
V-type proton ATPase subunit c' D 164 Lama Glama , Saccharomyces Cerevisiae MSTQLASNIYAPLYAPFFGFAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVVAVLIAGNLSPTEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIVALILNTRGSE
V-type proton ATPase subunit c E 160 Lama Glama , Saccharomyces Cerevisiae MTELCPVYAPFFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQKQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRATQDVVC
V-type proton ATPase subunit c F 160 Lama Glama , Saccharomyces Cerevisiae MTELCPVYAPFFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQKQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRATQDVVC
V-type proton ATPase subunit c G 160 Lama Glama , Saccharomyces Cerevisiae MTELCPVYAPFFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQKQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRATQDVVC
V-type proton ATPase subunit c H 160 Lama Glama , Saccharomyces Cerevisiae MTELCPVYAPFFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQKQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRATQDVVC
V-type proton ATPase subunit c I 160 Lama Glama , Saccharomyces Cerevisiae MTELCPVYAPFFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQKQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRATQDVVC
V-type proton ATPase subunit c J 160 Lama Glama , Saccharomyces Cerevisiae MTELCPVYAPFFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQKQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRATQDVVC
V-type proton ATPase subunit c K 160 Lama Glama , Saccharomyces Cerevisiae MTELCPVYAPFFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQKQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRATQDVVC
V-type proton ATPase subunit c L 160 Lama Glama , Saccharomyces Cerevisiae MTELCPVYAPFFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQKQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRATQDVVC
V-type proton ATPase subunit e M 73 Lama Glama , Saccharomyces Cerevisiae MSSFYTVVGVFIVVSAMSVLFWIMAPKNNQAVWRSTVILTLAMMFLMWAITFLCQLHPLVAPRRSDLRPEFAE
V0 assembly protein 1 N 265 Lama Glama , Saccharomyces Cerevisiae MVFGQLYALFIFTLSCCISKTVQADSSKESSSFISFDKESNWDTISTISSTADVISSVDSAIAVFEFDNFSLLDNLMIDEEYPFFNRFFANDVSLTVHDDSPLNISQSLSPIMEQFTVDELPESASDLLYEYSLDDKSIVLFKFTSDAYDLKKLDEFIDSCLSFLEDKSGDNLTVVINSLGWAFEDEDGDDEYATEETLSHHDNNKGKEGDDDILSSIWTEGLLMCLIVSALLLFILIVALSWISNLDITYGALEKSTNPIKKNN
Yeast V-ATPase subunit f O 85 Lama Glama , Saccharomyces Cerevisiae MRPVVSTGKAWCCTVLSAFGVVILSVIAHLFNTNHESFVGSINDPEDGPAVAHTVYLAALVYLVFFVFCGFQVYLARRKPSIELR
Nanobody 1WVA25 Q 146 Lama Glama , Saccharomyces Cerevisiae QVQLQESGGGLVQPGGSLRLSCVASGFTFSRYAMTWVRQAPGKGLEWVSDISSGGSSTFYTDSVKGRFTISRDNAKNTLYLQMNSLKPDDTAIYFCAKGVPSYYSDYERRSKRYDSRGQGTQVTVSSAAAYPYDVPDYGSHHHHHH
Nanobody 1WVA25 R 146 Lama Glama , Saccharomyces Cerevisiae QVQLQESGGGLVQPGGSLRLSCVASGFTFSRYAMTWVRQAPGKGLEWVSDISSGGSSTFYTDSVKGRFTISRDNAKNTLYLQMNSLKPDDTAIYFCAKGVPSYYSDYERRSKRYDSRGQGTQVTVSSAAAYPYDVPDYGSHHHHHH
Nanobody 1WVA25 S 146 Lama Glama , Saccharomyces Cerevisiae QVQLQESGGGLVQPGGSLRLSCVASGFTFSRYAMTWVRQAPGKGLEWVSDISSGGSSTFYTDSVKGRFTISRDNAKNTLYLQMNSLKPDDTAIYFCAKGVPSYYSDYERRSKRYDSRGQGTQVTVSSAAAYPYDVPDYGSHHHHHH
Nanobody 1WVA25 T 146 Lama Glama , Saccharomyces Cerevisiae QVQLQESGGGLVQPGGSLRLSCVASGFTFSRYAMTWVRQAPGKGLEWVSDISSGGSSTFYTDSVKGRFTISRDNAKNTLYLQMNSLKPDDTAIYFCAKGVPSYYSDYERRSKRYDSRGQGTQVTVSSAAAYPYDVPDYGSHHHHHH
V-type proton ATPase subunit a, vacuolar isoform A 840 Lama Glama , Saccharomyces Cerevisiae MAEKEEAIFRSAEMALVQFYIPQEISRDSAYTLGQLGLVQFRDLNSKVRAFQRTFVNEIRRLDNVERQYRYFYSLLKKHDIKLYEGDTDKYLDGSGELYVPPSGSVIDDYVRNASYLEERLIQMEDATDQIEVQKNDLEQYRFILQSGDEFFLKGDNTDSTSYMDEDMIDANGENIAAAIGASVNYVTGVIARDKVATLEQILWRVLRGNLFFKTVEIEQPVYDVKTREYKHKNAFIVFSHGDLIIKRIRKIAESLDANLYDVDSSNEGRSQQLAKVNKNLSDLYTVLKTTSTTLESELYAIAKELDSWFQDVTREKAIFEILNKSNYDTNRKILIAEGWIPRDELATLQARLGEMIARLGIDVPSIIQVLDTNHTPPTFHRTNKFTAGFQSICDCYGIAQYREINAGLPTIVTFPFMFAIMFGDMGHGFLMTLAALSLVLNEKKINKMKRGEIFDMAFTGRYIILLMGVFSMYTGFLYNDIFSKTMTIFKSGWKWPDHWKKGESITATSVGTYPIGLDWAWHGTENALLFSNSYKMKLSILMGFIHMTYSYFFSLANHLYFNSMIDIIGNFIPGLLFMQGIFGYLSVCIVYKWAVDWVKDGKPAPGLLNMLINMFLSPGTIDDELYPHQAKVQVFLLLMALVCIPWLLLVKPLHFKFTHKKKSHEPLPSTEADASSEDLEAQQLISAMDADDAEEEEVGSGSHGEDFGDIMIHQVIHTIEFCLNCVSHTASYLRLWALSLAHAQLSSVLWTMTIQIAFGFRGFVGVFMTVALFAMWFALTCAVLVLMEGTSAMLHSLRLHWVESMSKFFVGEGLPYEPFAFEYKDMEVAVASASSSASS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-10-31
Deposition Author(s): Knight, K. , Wilkens, S.