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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9C39

Bacteriophage sf14 neck c6 reconstruction

PDB DOI: 10.2210/pdb9c39/pdb

Classification: VIRUS
Organism(s): Shigella Phage Sf14

Deposited: 2024-05-31
Deposition Author(s): Braverman, S.G. , Doore, S.M. , Kerns, H.R. , Subramanian, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.4 Å

9c39
Literature

Bacteriophage sf14 neck c6 reconstruction

Braverman, S.G. , Doore, S.M. , Kerns, H.R. , Subramanian, S.

Primary Citation of Related Structures: 9C39


Proteins
Molecule Chains Sequence Length Organism Sequence
Portal protein A 488 Shigella Phage Sf14 MADITETQESLPPFRMGEVGSLGLKVRSGRIYEEPRQALRFPESIKTFQLMMRDPSVAASVNIIKMFVRKVNWRFVPPKGKEKDAKMIERANFFNSLMNDMEHDWADFINSVMSFCTYGFCVNEKVYKKRQGKKGKYPSKYNDGLIGWAKLPIRNQTTLDKWYFDSDYRKVIGVRQNLRNVSHTAGAINLGEQPLTRKLPRSKFLLFKYDDEYGNPEGRSPLLNAYVPWKYKVQIEEFEAVGVSRDLVGMPKIGLPPDYLGEDAEPEKKAFVKYCQEVVNDLIANDRAGLIWPRFIDPETKEDIFEFSLVSRQGAKAYDTGSIIDRYSKQIMMAFMSDVLAMGQSKYGSFSLADSKTSLLAMSVDILLKQIKNVINRDLVAQTYALNMWDDEEHVEIVYDDIETPDIESIGSYVQKTVAVGAMEVDKALSDKLREHIGLEPADESKPVSENLSPNTQSRSGDGYQTAGEGTAKTPSAKDPSTANKANK
Portal protein B 488 Shigella Phage Sf14 MADITETQESLPPFRMGEVGSLGLKVRSGRIYEEPRQALRFPESIKTFQLMMRDPSVAASVNIIKMFVRKVNWRFVPPKGKEKDAKMIERANFFNSLMNDMEHDWADFINSVMSFCTYGFCVNEKVYKKRQGKKGKYPSKYNDGLIGWAKLPIRNQTTLDKWYFDSDYRKVIGVRQNLRNVSHTAGAINLGEQPLTRKLPRSKFLLFKYDDEYGNPEGRSPLLNAYVPWKYKVQIEEFEAVGVSRDLVGMPKIGLPPDYLGEDAEPEKKAFVKYCQEVVNDLIANDRAGLIWPRFIDPETKEDIFEFSLVSRQGAKAYDTGSIIDRYSKQIMMAFMSDVLAMGQSKYGSFSLADSKTSLLAMSVDILLKQIKNVINRDLVAQTYALNMWDDEEHVEIVYDDIETPDIESIGSYVQKTVAVGAMEVDKALSDKLREHIGLEPADESKPVSENLSPNTQSRSGDGYQTAGEGTAKTPSAKDPSTANKANK
Phage protein C 149 Shigella Phage Sf14 MCYTGDPANNPLDRVRILCTDTDNNEILIDQSVLEWFYQESGKDEKKAAIKALKYLLFQVAKMGDEKVGGVYLRNSSRFKSLKAVYDDLVKSSVSGLPYAGGINQCDIDMRRQNPCSVKKYTEYGDAVRYYGRDYCERVNGVFIIERDE
Phage protein D 149 Shigella Phage Sf14 MCYTGDPANNPLDRVRILCTDTDNNEILIDQSVLEWFYQESGKDEKKAAIKALKYLLFQVAKMGDEKVGGVYLRNSSRFKSLKAVYDDLVKSSVSGLPYAGGINQCDIDMRRQNPCSVKKYTEYGDAVRYYGRDYCERVNGVFIIERDE
Head-closure protein E 133 Shigella Phage Sf14 MRLLNRHSFVVKRKVSEDGHYNEDGDWVASQDVVSINCKGNIQPYIKGSVKNGTQIVLPEGIRLTDTRILFTVAELRTSDDVDWTEADIVMIKGHEYEVFMTMDWSEQLAHTSHYEYIIIRRDKMNAVRNSRT
gp119 F 199 Shigella Phage Sf14 MQLETAELEKGIVRVLVDVIGHRLARDKNNRPNVIRAYPSDNSNDKGLKPDQPFITVYCQDATTPYGWVLDKFVEDDAVCYRIAFQIPVLITVNGKGAHSIMLELKQRLEMSTTRDYLADMTGASVLDTGAIPNDYTYLNTDFENSAPLVVTLVKNSVLKDERGSIIERVIVDGELVYEEGQEPPEYTIHLDVDSKGVK
gp40 G 148 Shigella Phage Sf14 MAMYQQYSPKDVVCSWNGIAIEGFAPDSFLRLQRTSPLVTPVVGAGGQVALTRNADKTGTIEIELMQTSLSNQMLSAIQAKQDDMELEEDISSNFVIYDPSGSVLATGINAWLQELPQIELGRDQNSKTWIFGCEKLDYTSTIPASSV
Putative structural protein H 450 Shigella Phage Sf14 MWNPIVNVDITLNTAGTTREGFGLPLFLASTDNFEERIRGYTSLTEVAEDFDESTAAYKAAKQLWSQTPKVTQLYIGRRTMQYTVSIPDTVAEGSEYSLTVAIGGGVSQPFQYTAKENDTALIVLNEFKSQIEASPTIKDGVNASVTGTGASATMIITKAGDNDFVKVTSITPTTSIAATTADTASAALASIETYSTDWYFISAEDRTQQFVLAMASEIQARKKIFFTANADVKALQGTDLTSATDVPAQLAKSKYTRTVCLWHHTAEFDYPEMAYIAYGAPYDAGSIAWGNAQLTGVAASLQPANQRPLISIQKSALDTRSCNFIDLDGGVPVVRRGITSGGEWIDIVRGVDWLESDLKTSLRDLLINQKGGKITYDDTGITRIRQVIETSLQRAVNRKFLSTYTVTVPKASQVALADKKARILKDITFHGILAGAILDVDLKGTVAYE
gp127 I 166 Shigella Phage Sf14 MAEVISISNATRVHSYRGVLIITDELTVEAGSRVSLSGYVSDGGTSDVFTICRLLDAPMNGKQFISNNCNEIVKIPFDSSCLLGVKLYNCENKRVNVNSVEAAFITIDTAFQSPMTVNKESNRLEYIFSQNDYKVLVKGKVYDMIVNVVDESGNHSTILKQKVRFN
gp127 J 166 Shigella Phage Sf14 MAEVISISNATRVHSYRGVLIITDELTVEAGSRVSLSGYVSDGGTSDVFTICRLLDAPMNGKQFISNNCNEIVKIPFDSSCLLGVKLYNCENKRVNVNSVEAAFITIDTAFQSPMTVNKESNRLEYIFSQNDYKVLVKGKVYDMIVNVVDESGNHSTILKQKVRFN
Phage protein K 110 Shigella Phage Sf14 MGTLTIDGKNKILATLTPTTIVLHNVDPTADPTANKVTQPVAIFFSEPNNGLIASEDTVNITVPASATVSHFSLWDDNSKCVATGALSSPQFFAEEGIYVISSVSIDLNK
Phage protein L 110 Shigella Phage Sf14 MGTLTIDGKNKILATLTPTTIVLHNVDPTADPTANKVTQPVAIFFSEPNNGLIASEDTVNITVPASATVSHFSLWDDNSKCVATGALSSPQFFAEEGIYVISSVSIDLNK
Phage protein M 110 Shigella Phage Sf14 MGTLTIDGKNKILATLTPTTIVLHNVDPTADPTANKVTQPVAIFFSEPNNGLIASEDTVNITVPASATVSHFSLWDDNSKCVATGALSSPQFFAEEGIYVISSVSIDLNK
Phage protein N 110 Shigella Phage Sf14 MGTLTIDGKNKILATLTPTTIVLHNVDPTADPTANKVTQPVAIFFSEPNNGLIASEDTVNITVPASATVSHFSLWDDNSKCVATGALSSPQFFAEEGIYVISSVSIDLNK
Phage protein O 110 Shigella Phage Sf14 MGTLTIDGKNKILATLTPTTIVLHNVDPTADPTANKVTQPVAIFFSEPNNGLIASEDTVNITVPASATVSHFSLWDDNSKCVATGALSSPQFFAEEGIYVISSVSIDLNK
Phage protein P 110 Shigella Phage Sf14 MGTLTIDGKNKILATLTPTTIVLHNVDPTADPTANKVTQPVAIFFSEPNNGLIASEDTVNITVPASATVSHFSLWDDNSKCVATGALSSPQFFAEEGIYVISSVSIDLNK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-05-31
Deposition Author(s): Braverman, S.G. , Doore, S.M. , Kerns, H.R. , Subramanian, S.