9BXU
Cryo-em structure of atp synthase dp state
PDB DOI: 10.2210/pdb9bxu/pdb
Classification: MEMBRANE PROTEIN Organism(s): Sus Scrofa
Deposited: 2024-05-22 Deposition Author(s): Maharjan, R. , Tringides, M. , Zhang, Z.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.0 Å
Cryo-em structure of atp synthase dp state
Maharjan, R. , Tringides, M. , Zhang, Z.
Primary Citation of Related Structures: 9BXU
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| ATP synthase protein 8 | 8 | 67 | Sus Scrofa | MPQLDTSTWFITITSMIMTLFILFQLKISNYSYPASPESIELKTQKHSTPWEMKWTKIYLPLLLPPR |
| ATP synthase subunit e, mitochondrial | U | 71 | Sus Scrofa | MVPPVQVSPLIKLGRYSALFLGVAYGAKRYNYLKPRAEEERRIAAEEKKKQDELKRIERELAEAQEDSILK |
| ATP synthase subunit b | V | 238 | Sus Scrofa | ICIIATYRVLQATRIFHTGQPSLAPVPPLPEHGGKVRLGLIPEEFFQFLYPKTGVTGPYVLGTGLILYLLSKEIYVITAETFSAISTIGVLVYIVKKYGASIGAFADKLNEQKIAQLEEVKQASIKQIQDAIDLEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLHRVYKEIKNRLDYHISVQNMMRQKEQEHMIRWVEKHVVQSISAQQEKETIAKCIADLKLLAKKAQAQPVL |
| ATP synthase subunit f, mitochondrial | W | 88 | Sus Scrofa | MASVVPLKDRRLLEVKLGELPSWILMRDFTPSGIAGAFQRGYYRYYNKYVNVKKGSVAGLSMVLAAYVVFNYCRSYKELKHERLRKYH |
| ATP synthase subunit alpha | A | 550 | Sus Scrofa | MISGPLKIMTADLLKGMVSKNALGSSFVAARNLHASNTRLQKTGTAEVSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYAPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVISQHQALLGKIRADGKISEETDAKLKEIVTNFLAGFEA |
| ATP synthase subunit alpha | C | 550 | Sus Scrofa | MISGPLKIMTADLLKGMVSKNALGSSFVAARNLHASNTRLQKTGTAEVSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYAPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVISQHQALLGKIRADGKISEETDAKLKEIVTNFLAGFEA |
| ATP synthase subunit beta | D | 570 | Sus Scrofa | MLRVISSKMIQRTCLLQSRPRPQLRGVGGQTAAALSLYPGSAMLGFVGRVASASASGALRGLSPSAPLPQAQLLLRAAPAALQPARDYATQPSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAAIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHLGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHS |
| ATP synthase F1 subunit epsilon | I | 136 | Sus Scrofa | FPFNNCREQTNSLNCLGLQAAPRWTGAEGLRPLLPGLSLGTHPGLSRTSAACHGVGSPRPSWAARSEPTLTGPRDSTRRAHSSDIMVAYWRQAGLSYIRYSQICAKAVRDALKAEFKANAEKTSGSNVKIVKVKKE |
| ATP synthase lipid-binding protein | K | 141 | Sus Scrofa | MFACTKLACTPALIRAGSRVAYRPISASVLSRPEARPGEGSTVFNGAQNGVSQPIQREFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM |
| ATP synthase subunit alpha | B | 550 | Sus Scrofa | MISGPLKIMTADLLKGMVSKNALGSSFVAARNLHASNTRLQKTGTAEVSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYAPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVISQHQALLGKIRADGKISEETDAKLKEIVTNFLAGFEA |
| ATP synthase subunit beta | E | 570 | Sus Scrofa | MLRVISSKMIQRTCLLQSRPRPQLRGVGGQTAAALSLYPGSAMLGFVGRVASASASGALRGLSPSAPLPQAQLLLRAAPAALQPARDYATQPSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAAIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHLGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHS |
| ATP synthase subunit beta | F | 570 | Sus Scrofa | MLRVISSKMIQRTCLLQSRPRPQLRGVGGQTAAALSLYPGSAMLGFVGRVASASASGALRGLSPSAPLPQAQLLLRAAPAALQPARDYATQPSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAAIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHLGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHS |
| ATP synthase subunit gamma | G | 273 | Sus Scrofa | MATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERDLKPARVYGIGSLALYEKADIKVPEDKKKHLIIGVSSDRGLCGAIHSSVAKQIKSEVANLTAAGKEVKIVGVGDKIRGILHRTHSDQFLVTFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNRFRSVISYKTEEKPIFSLDTVASAESMSIYDDIDADVLRNYQEYSLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL |
| ATP synthase F1 subunit delta | H | 168 | Sus Scrofa | MLPATLLRRSGLGRVVRQARAYAEAAAAPASAAGPGQMSFTFASPTQVFFNGANVRQVDVPTQTGAFGILASHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDPGVAKANLEKAQSELLGAADEASRAEIQIRIEANEALVKALE |
| ATPase inhibitor, mitochondrial | J | 108 | Sus Scrofa | MAATALAVRSRIGAWSVWAMQSRGFSSDTPEGVRSGAGAVRDAGGAFGKKEQADEERYFRARAREQLAALKKHHENEISHHVKEIERLQKEIERHKQSIKKLKNDDDD |
| ATP synthase lipid-binding protein | L | 141 | Sus Scrofa | MFACTKLACTPALIRAGSRVAYRPISASVLSRPEARPGEGSTVFNGAQNGVSQPIQREFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM |
| ATP synthase lipid-binding protein | M | 141 | Sus Scrofa | MFACTKLACTPALIRAGSRVAYRPISASVLSRPEARPGEGSTVFNGAQNGVSQPIQREFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM |
| ATP synthase lipid-binding protein | N | 141 | Sus Scrofa | MFACTKLACTPALIRAGSRVAYRPISASVLSRPEARPGEGSTVFNGAQNGVSQPIQREFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM |
| ATP synthase lipid-binding protein | O | 141 | Sus Scrofa | MFACTKLACTPALIRAGSRVAYRPISASVLSRPEARPGEGSTVFNGAQNGVSQPIQREFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM |
| ATP synthase lipid-binding protein | P | 141 | Sus Scrofa | MFACTKLACTPALIRAGSRVAYRPISASVLSRPEARPGEGSTVFNGAQNGVSQPIQREFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM |
| ATP synthase lipid-binding protein | Q | 141 | Sus Scrofa | MFACTKLACTPALIRAGSRVAYRPISASVLSRPEARPGEGSTVFNGAQNGVSQPIQREFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM |
| ATP synthase lipid-binding protein | R | 141 | Sus Scrofa | MFACTKLACTPALIRAGSRVAYRPISASVLSRPEARPGEGSTVFNGAQNGVSQPIQREFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM |
| ATP synthase subunit O, mitochondrial | S | 213 | Sus Scrofa | MASQAVSGLSRQVRCFSTSVVRPFAKLVRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPKVAASIMNPYVKRSIKVKSLSDMTAKEKFSPLTSNLINLLAENGRLSSTPGVISAFSTMMSVHRGEVPCSVTTASPLDEATLTELKTVLKSFLSKGQILKLEVKVDPSIMGGMIVRIGEKYVDMSAKTKIQKLSRAMREIF |
| ATP synthase subunit | T | 103 | Sus Scrofa | MAQFVRNLAEKAPVLVNAAVTYSKPRLATFWHYAKVELVPPTPAEIPTAIQSLKKIVNSAQTGSFKQLTVKEALLNGLVATEVLMWFYVGEIIARAQHGIPTI |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-05-22 Deposition Author(s): Maharjan, R. , Tringides, M. , Zhang, Z.