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9BGJ

Sgrai mutant k242a endonuclease dna-bound dimer with mg2+ and intact primary site dna

PDB DOI: 10.2210/pdb9bgj/pdb

Classification: HYDROLASE/DNA
Organism(s): Dengue Virus 4 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2024-04-18
Deposition Author(s): Horton, N.C. , Lyumkis, D. , Shan, Z.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.34 Å

9bgj
Literature

Sgrai mutant k242a endonuclease dna-bound dimer with mg2+ and intact primary site dna

Horton, N.C. , Lyumkis, D. , Shan, Z.

Primary Citation of Related Structures: 9BGJ


Proteins
Molecule Chains Sequence Length Organism Sequence
SgraIR restriction enzyme A 352 Dengue Virus 4 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MPFTYSIEATRNLATTERCIQDIRNAPVRNRSTQFQLAQQNMLAYTFGEVIPGFASAGINGMDYRDVIGRPVENAVTEGTHFFRDDFRVDSNAKAKVAGDIFEIVSSAVMWNCAARWNSLMVGEGWRSQPRYSRPTLSPSPRRQVAVLNLPRSFDWVSLLVPESQEVIEEFRAGLRKDGLGLPTSTPDLAVVVLPEEFQNDEMWREEIAGLTRPNQILLSGAYQRLQGRVQPGEISLAVAFARSLRSDRLYQPLYEANVMQLLLEGKLGAPKVEFEVHTLAPEGTNAFVTYEAASLYGLAEGRSAVHRAIRELYVPPTAADLARRFFAFLNERMEKVNGENLYFQSHHHHHH
SgraIR restriction enzyme B 352 Dengue Virus 4 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MPFTYSIEATRNLATTERCIQDIRNAPVRNRSTQFQLAQQNMLAYTFGEVIPGFASAGINGMDYRDVIGRPVENAVTEGTHFFRDDFRVDSNAKAKVAGDIFEIVSSAVMWNCAARWNSLMVGEGWRSQPRYSRPTLSPSPRRQVAVLNLPRSFDWVSLLVPESQEVIEEFRAGLRKDGLGLPTSTPDLAVVVLPEEFQNDEMWREEIAGLTRPNQILLSGAYQRLQGRVQPGEISLAVAFARSLRSDRLYQPLYEANVMQLLLEGKLGAPKVEFEVHTLAPEGTNAFVTYEAASLYGLAEGRSAVHRAIRELYVPPTAADLARRFFAFLNERMEKVNGENLYFQSHHHHHH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
40-1 DNA c 80 NA GATGCGTGGGTCTTCACACCGGTGGATGCGTGGGTCTTCATGAAGACCCACGCATCCACCGGTGTGAAGACCCACGCATC
40-1 DNA d 80 NA GATGCGTGGGTCTTCACACCGGTGGATGCGTGGGTCTTCATGAAGACCCACGCATCCACCGGTGTGAAGACCCACGCATC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-04-18
Deposition Author(s): Horton, N.C. , Lyumkis, D. , Shan, Z.