9B1W
Hws19 strain wt mycobacterial ribosome
PDB DOI: 10.2210/pdb9b1w/pdb
Classification: RIBOSOME Organism(s): Mycolicibacterium Smegmatis
Deposited: 2024-03-14 Deposition Author(s): Chen, Y. , Fraser, J.S. , Javid, B. , Young, I.D.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.26 Å
Hws19 strain wt mycobacterial ribosome
Chen, Y. , Fraser, J.S. , Javid, B. , Young, I.D.
Primary Citation of Related Structures: 9B1W
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Large ribosomal subunit protein uL3 | A | 214 | Mycolicibacterium Smegmatis | ARKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTTERDGYSAVQLAYGEISPRKVIKPVAGQFAAAGVNPRRHVAELRLDDEAAVAEYEVGQELTAEIFSDGAYVDVTGTSKGKGFAGTMKRHGFRGQGAAHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGNDRVTTQNLKVHKVDAENGVLLIKGAIPGRNGGLVVVRSAIKRG |
| Large ribosomal subunit protein bL17 | J | 118 | Mycolicibacterium Smegmatis | PKPTKGPRLGGSSSHQSALLANLATSLFEHGRIKTTEPKARALRPYAEKLITHAKKGALHNRREVMKKIRDKDVVHTLFAEIGPFYADRNGGYTRIIKVENRKGDNAPMAVIELVREK |
| Large ribosomal subunit protein uL18 | K | 126 | Mycolicibacterium Smegmatis | AHKPVGQNISEVRRNARLRRHARLRKKVAGTAEVPRLVVNRSARHIHVQLVNDLNGTTLAAASSIEADVRAIDGDKKAHSVRVGQLIAERAKAAGVETVVFDRGGYTYGGRIAALADAAREAGLKF |
| Large ribosomal subunit protein bL19 | L | 113 | Mycolicibacterium Smegmatis | MNTLDFVDQASLRDDIPTFSPGDTVNVHVKVIEGSKERIQVFKGVVIRRQGGGISETFTVRKESYGVGVERTFPVHSPNIDHIDVLTRGDVRRAKLYYLRELRGKKAKIKEKR |
| Large ribosomal subunit protein bL20 | M | 124 | Mycolicibacterium Smegmatis | ARVKRALNAQKKRRTVLKASKGYRGQRSRLYRKAKEQQLHSLTYAYRDRRARKGEFRKLWISRINAAARANDITYNRLIQGLKAAGVEVDRKNLAELAVSDPAAFTALVDVARAALPEDVNAPS |
| Large ribosomal subunit protein bL21 | N | 100 | Mycolicibacterium Smegmatis | TYAIVKTGGKQYKVAAGDVVKVEKLDSEPGASVSLPVALVVDGANVTSKADDLAKVAVTAEVLEHTKGPKIRIHKFKNKTGYHKRQGHRQQLTVLKVTGI |
| 50S ribosomal protein L22 | O | 114 | Mycolicibacterium Smegmatis | EFPSATAKARYVRVSATKARRVIDLVRGKSVEEALDILRWAPQAASEPVAKVIASAAANAQNNEGLDPSTLVVATVYADEGPTAKRIRPRAQGRAFRIRKRTSHITVIVESRPP |
| Large ribosomal subunit protein uL23 | P | 97 | Mycolicibacterium Smegmatis | ATITDPRDIILAPVISEKSYGLIEDNVYTFVVHPDSNKTQIKIAIEKIFDVKVDSVNTANRQGKRKRTRTGFGKRKSTKRAIVKLAAGSKPIDLFGA |
| Large ribosomal subunit protein uL24 | Q | 97 | Mycolicibacterium Smegmatis | MKVHKGDTVLVISGKDKGAKGKVLVAYPDRNKVLVEGVNRIKKHTAVSGGIVTQEAPIHVSNVMVVDSDGKPTRVGYRIDDETGKKVRIAKTNGKDI |
| Large ribosomal subunit protein bL25 | R | 192 | Mycolicibacterium Smegmatis | TANIPNKLTANVRTRTGKGASRQARRDGKVPAVLYGHGTDPQHLELNARDFAAVLRSHGTNAILTLDIEGTEQLALTKALDVHPIRRNIQHADLLVVQRGEKVTVEVTVLVEGDATPGTLVTQDANTIEIEAEALSIPEQLTVSVEGVEAGTQITAGQISLPEGVNLISDPELLVVNVVEAPSAEALEEEGA |
| Large ribosomal subunit protein bL27 | S | 79 | Mycolicibacterium Smegmatis | SSSRNGRDSAAQRLGVKRFGGQVVKAGEILVRQRGTHFHPGVNVGRGGDDTLFALAPGAVEFGAKRGRKTVNIVPVARP |
| Large ribosomal subunit protein uL4 | B | 209 | Mycolicibacterium Smegmatis | TLKVDVKTPAGKTDGSVELPAELFDVEPNIALMHQVVTAQLAAKRQGTHSTKTRGEVSGGGKKPYRQKGTGRARQGSTRAPQFTGGGTVHGPKPRDYSQRTPKKMIAAALRGALSDRARNDRIHAVTELVEGQTPSTKSAKTFLGTLTENKKVLVVIGRTDEVGAKSVRNLPGVHVISPDQLNTYDVLNADDVVFSVEALNAYISANSK |
| Large ribosomal subunit protein bL28 | T | 63 | Mycolicibacterium Smegmatis | AAVCDICGKGPGFGKSVSHSHRRTSRRWNPNIQPVRAVTRPGGNKQRINACTSCIKAGKVSRA |
| Large ribosomal subunit protein uL10 | V | 126 | Mycolicibacterium Smegmatis | MAKADKATAVADIAEQFKASTATVVTEYRGLTVANLAELRRALGDSATYTVAKNTLVKRAASEAGIEGLDELFAGPTAIAFVKGEAVDAAKAIKKFAKDNKALVIKGGYMDGKALSVADVEKIADL |
| Large ribosomal subunit protein bL32 | X | 54 | Mycolicibacterium Smegmatis | AVPKRRMSRANTRSRRAQWKAEAPGLVTVSVAGQQRKVPRRLLKAARLGLVDLD |
| Large ribosomal subunit protein bL33A | Y | 49 | Mycolicibacterium Smegmatis | DVRPKITLACEVCKHRNYITKKNRRNDPDRLEIKKFCPNCGTHQPHKES |
| Large ribosomal subunit protein uL29 | U | 64 | Mycolicibacterium Smegmatis | GTTPGELRELTDDELKDKLRESKEELFNLRFQMATGQLSNNRRLRTVRQEIARVYTVLRERELG |
| 50S ribosomal protein L34 | Z | 46 | Mycolicibacterium Smegmatis | AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA |
| Small ribosomal subunit protein uS3 | C | 208 | Mycolicibacterium Smegmatis | GQKINPHGFRLGITTEWKSRWYADKQYKDYVKEDVAIRKLLATGLERAGIADVEIERTRDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPESQAQLVAQGVAEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRADIDYGLYEAKTTFGRIGVKVWIYKGDIVG |
| Small ribosomal subunit protein uS4 | D | 200 | Mycolicibacterium Smegmatis | ARYTGPATRKSRRLGVDLVGGDQSFEKRPYPPGQHGRARIKESEYRQQLQEKQKARFSYGVMEKQFRRYYEEANRQPGKTGDNLLRILESRLDNVVYRAGLARTRRMARQLVSHGHFLVNGVKVDIPSYRVSQYDIIDVKEKSLNTLPFQIARETAGERPIPSWLQVVGERQRILVHQLPERAQIDVPLTEQLIVELYSK |
| Small ribosomal subunit protein uS5 | E | 180 | Mycolicibacterium Smegmatis | NYIERVVSINRVSKVVKGGRRFSFTALVIVGDGKGMVGVGYGKAKEVPAAIAKGVEEARKNFFRVPLIGSTITHPVQGEAAAGVVMLRPASPGTGVIAGGAARAVLECAGVHDILAKSLGSDNAINVVHATVAALKLLQRPEEVAARRGLPIEDVAPAGMLKARRESEALAAAAAREGSA |
| Small ribosomal subunit protein bS6 | F | 96 | Mycolicibacterium Smegmatis | MRPYEIMVILDPTLDERTVAPSLETFLNVIRKDGGTVDKVDIWGRRRLAYEIAKHAEGIYAVIDVKAEPATVSELDRQLNLNESVLRTKVLRTDKH |
| Small ribosomal subunit protein uS7 | G | 155 | Mycolicibacterium Smegmatis | PRKGPAPKRPLVNDPVYGSQLVTQLVNKVLLEGKKSLAERIVYGALEQAREKTGTDPVVTLKRALDNVKPALEVRSRRVGGATYQVPVEVRPDRSTTLALRWLVNFSRQRREKTMVERLANEILDASNGLGASVKRREDTHKMAEANRAFAHYRW |
| Small ribosomal subunit protein uS8 | H | 131 | Mycolicibacterium Smegmatis | TMTDPIADFLTRLRNANSAYHDEVTLPHSKLKANIAEILKREGYISDYRTEDARVGKSLVVQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGGLGVAIISTSSGLLTDRQAARQGVGGEVLAYVW |
| Small ribosomal subunit protein uS9 | I | 126 | Mycolicibacterium Smegmatis | PIQTVGRRKEAVVRVRLVPGTGQFNLDGRTLENYFPNKVHQQLIKAPLVTVDRVDQFDIYAHLDGGGPSGQAGALRLAIARALILVQPEDRPALKKAGFLTRDPRAIERKKYGLKKARKAPQYSKR |
| ribosomal protein bL37 | 5 | 23 | Mycolicibacterium Smegmatis | AKRGRKKRDRKHSKANHGKRPNA |
| Large ribosomal subunit protein uL30 | W | 59 | Mycolicibacterium Smegmatis | AELKITQVRSTIGARWKQRESLRTLGLKKIRQSVVREDNAQTRGLINTVHHLVEVEEVG |
| Large ribosomal subunit protein bL35 | 1 | 63 | Mycolicibacterium Smegmatis | PKAKTHSGASKRFRRTGTGKIVRQKANRRHLLEHKPTKRTRRLDGRTTVSAADNSRINKLLNG |
| 50S ribosomal protein L36 | 2 | 37 | Mycolicibacterium Smegmatis | MKVNPSVKPICDKCRVIRRHGRVMVICSDPRHKQRQG |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-03-14 Deposition Author(s): Chen, Y. , Fraser, J.S. , Javid, B. , Young, I.D.