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9B0L

Cryo-em structure of acanthamoeba polyphaga mimivirus fanzor2 ternary complex

PDB DOI: 10.2210/pdb9b0l/pdb

Classification: DNA BINDING PROTEIN/DNA/RNA
Organism(s): Acanthamoeba Polyphaga Mimivirus , Synthetic Construct

Deposited: 2024-03-12
Deposition Author(s): Kalathur, R.C. , Kellogg, E.H. , Qayyum, M.Z. , Schargel, R.D. , Tanwar, A.S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.99 Å

9b0l
Literature

Cryo-em structure of acanthamoeba polyphaga mimivirus fanzor2 ternary complex

Kalathur, R.C. , Kellogg, E.H. , Qayyum, M.Z. , Schargel, R.D. , Tanwar, A.S.

Primary Citation of Related Structures: 9B0L


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*GP*AP*CP*GP*GP*TP*CP*GP*GP*GP*C)-3') b 11 NA GACGGTCGGGC
DNA (5'-D(P*CP*CP*CP*A)-3') d 4 NA CCCA
DNA (5'-D(P*AP*GP*GP*AP*GP*GP*TP*GP*GP*CP*TP*GP*CP*CP*CP*CP*GP*AP*CP*CP*GP*TP*C)-3') a 23 NA AGGAGGTGGCTGCCCCGACCGTC
RNA (117-MER) c 247 NA AAAAAUAGUCUAAUAAAAUCAGGGGUACAUUCCGCUAGUACUCCACCCUACGGGUUAAGCAAAUGAGAAUAUCGAAACGGUAUGCACAGGAUUCUUCGAGUGAUAAUCUUAGGAUGACUCACUAAGGAGAUGACUAAAGUGUAUCAUUCAAUAUUGUAUUGAACGGUAUUCUUCCAUAGAGAGUUGAUUUUUGGAGUAUCCAAAAAUAUCAACUUUUUAUGAGCGGGCAGCCACCUCCUUGUUAUUG

Proteins
Molecule Chains Sequence Length Organism Sequence
TnpB-like protein L79 P 520 Acanthamoeba Polyphaga Mimivirus , Synthetic Construct MKEAVKNVKPKVPAKKRIITGSKTKKKVFVKKKPPDKKPLKKPVKKTVKTDKPKSIYVPNKDLKISKWIPTPKKEFTEIETNSWYEHRKFENPNKSPVQTYNKIVPVVPPESIKQQNLANKRKKTNRPIVFISSEKIRIYPTKDQQKILQTWFRLFAYMYNCTIDYINSKKVVLESGRINVAATRKVCNKISVRKAQKTIRDNLIQSTNPSIMTHIIDEAIGLACSNYKTCLTNYIERHIKKFDIKPWNMSKRKKIIIIEANFFKKGTFCPTVFPKMESSKPLTMIDKTVTLQYDSDTRKYILFVPRVTPKYSVNKEKNSCGIDPGLRDFLTVYSENETQSICPIEIVVNTTKNEYKKIDKINEIIKTKPNLNSKRKKKLNRGLRKYHRRVTNKMKDMHYKVSHELVNTFDKICIGKLNVKSILSKANTVLKSALKRKLATLSFYRFTQRLTHMGYKYGTEVVNVNEYLTTKTCSNCGKIKDLGASKIYECESCGMYADRDENAAKNILKVGLKPWYKQK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-03-12
Deposition Author(s): Kalathur, R.C. , Kellogg, E.H. , Qayyum, M.Z. , Schargel, R.D. , Tanwar, A.S.