9AU1
Sars-cov-2 xbb.1.5 rbd bound to the vir-7229 and the s309 fab fragments
PDB DOI: 10.2210/pdb9au1/pdb
Classification: VIRAL PROTEIN Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2
Deposited: 2024-02-27 Deposition Author(s): Cameroni, E. , Corti, D. , Czudnochowski, N. , Errico, J. , Marco, A.D. , Nix, J.C. , Park, Y.J. , Pinto, D. , Rietz, T. , Seattle Structural Genomics Center For Infectious Disease (Ssgcid) , Snell, G. , Structural Genomics Consortium (Sgc) , Veesler, D.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.41 Å
Sars-cov-2 xbb.1.5 rbd bound to the vir-7229 and the s309 fab fragments
Cameroni, E. , Corti, D. , Czudnochowski, N. , Errico, J. , Marco, A.D. , Nix, J.C. , Park, Y.J. , Pinto, D. , Rietz, T. , Seattle Structural Genomics Center For Infectious Disease (Ssgcid) , Snell, G. , Structural Genomics Consortium (Sgc) , Veesler, D.
Primary Citation of Related Structures: 9AU1
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| S309 Fab heavy chain | M | 230 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC |
| S309 Fab light chain | N | 212 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC |
| VIR-7229 Fab heavy chain | H | 225 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | EVQLVESGGSVVQPGRALRLSCAASGITFSSFGMYWVRQAPGKGLEWLGYIAYDGSDTYYADSVKGRFTISRDNSKNTLYLQMNSLRIEDTAVYYCAKDYYPLLSYYYGLDVWGQGTTVTVFNQIKPPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC |
| VIR-7229 Fab light chain | L | 216 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | QSVLTQPRSVSGSPGQSVTISCTGTSSDVGAYNYVSWYQQHPGKAPKFMIYDVDQRPSGVPDRFSGSKSGNTASLIISGLQAEDEADYYCSSYAGSYIWVFGGGTQLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS |
| SARS-CoV-2 XBB.1.5 RBD | R | 250 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | MEWSWVFLFFLSVTTGVHSRFPNITNLCPFHEVFNATTFASVYAWNRKRISNCVADYSVIYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKPSGNYNYLYRLFRKSKLKPFERDISTEIYQAGNKPCNGVAGPNCYSPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTHHHHHHHHGSGSGLNDIFEAQKIEWHE |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2024-02-27 Deposition Author(s): Cameroni, E. , Corti, D. , Czudnochowski, N. , Errico, J. , Marco, A.D. , Nix, J.C. , Park, Y.J. , Pinto, D. , Rietz, T. , Seattle Structural Genomics Center For Infectious Disease (Ssgcid) , Snell, G. , Structural Genomics Consortium (Sgc) , Veesler, D.