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FASTA Sequence PDB Format mmCIF Format
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8ZNJ

Cryo-em structure of a short prokaryotic argonaute system from archaeon suldolobus islandicus

PDB DOI: 10.2210/pdb8znj/pdb

Classification: RNA BINDING PROTEIN/RNA/DNA
Organism(s): Saccharolobus Islandicus M.16.4 , Synthetic Construct

Deposited: 2024-05-27
Deposition Author(s): Dai, Z.K. , Guan, Z.Y. , Han, W.Y. , Zou, T.T.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.0 Å

8znj
Literature

Cryo-em structure of a short prokaryotic argonaute system from archaeon suldolobus islandicus

Dai, Z.K. , Guan, Z.Y. , Han, W.Y. , Zou, T.T.

Primary Citation of Related Structures: 8ZNJ


Proteins
Molecule Chains Sequence Length Organism Sequence
Piwi domain-containing protein A 459 Saccharolobus Islandicus M.16.4 , Synthetic Construct MSEYATILPENKINVIFRSNNKYHVPEFITVFKPYEGRDINLQVLVVNGDNEIYDLTKLLFYEIYVKDDTKYPWPYTKTRGGISRVFGIRYNFDPSTISRININSENDFISSISNQLDMNRFNVAVIIANRKLTKEFHDKTKAALIGSRIRTQFVTFTTLKRLKNRKYKATIPLPLAVQLIAKAGGTPWIVDSSIYNDLSKNVSSNGMLMGIAFARTRKDKITYSVGYFTTLNNYYQRFDVQPINESAPITDSTEGLYVPKEAMVKTLESGIGWYKNIIGITPPLLIIFKTSPMHKDEKEAIEAVLGKDIKWVFIHAQYNTPVRIFGNKEDDYKVNRGTVIIKKRKRWNPNNGDYLHSEIVITATGKYRKPSTKNPSETEERYISGTPRPITLNVYSSFDVNPIGVAELTLSQIKADWEHPDIRKRKITVLKYANRMAKIIQYINNLSSVPSVDVRDVL
SiAgo-associated protein1, SiAga1 B 243 Saccharolobus Islandicus M.16.4 , Synthetic Construct MVLESNMFKTEQELPELIVNCIEIDNEKEAHKVVKEISKYGIFGVVREKKIFFTTVIEDDDFLKDRLTEVLKNYNINFSDIKKNCKKIIPEDNKDYFSQIFLNALRYVIYQKLEDINKDKKENERWTINESEDGVYICKERYDIDNYKICVGAKFTIKVFDNKAELYVDRKLKLYDEDKKLTRKLRGKINKMSVVEPKTRYEFIREIIQEISGNFDYINIKLSKDYTVNMTRTKLNEKLPTPF

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*UP*CP*AP*AP*AP*GP*CP*UP*UP*AP*GP*AP*UP*AP*CP*CP*CP*UP*GP*GP*A)-3') d 21 NA UCAAAGCUUAGAUACCCUGGA
DNA (5'-D(*CP*CP*TP*CP*CP*AP*GP*GP*GP*TP*AP*TP*CP*TP*AP*AP*GP*CP*TP*TP*TP*GP*AP*A)-3') e 24 NA CCTCCAGGGTATCTAAGCTTTGAA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-05-27
Deposition Author(s): Dai, Z.K. , Guan, Z.Y. , Han, W.Y. , Zou, T.T.