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FASTA Sequence PDB Format mmCIF Format
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8ZKM

Portal-tail of vibrio cholerae typing phage release vp1

PDB DOI: 10.2210/pdb8zkm/pdb

Classification: VIRAL PROTEIN
Organism(s): Vibrio Cholerae

Deposited: 2024-05-16
Deposition Author(s): Liu, H.R. , Pang, H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 6.7 Å

8zkm
Literature

Portal-tail of vibrio cholerae typing phage release vp1

Liu, H.R. , Pang, H.

Primary Citation of Related Structures: 8ZKM


Proteins
Molecule Chains Sequence Length Organism Sequence
ring protein of release VP1 A 239 Vibrio Cholerae MSSWDRFDTPWDSIIDESTWEHYTFKYDASFEAFSSMEVDEDLTITVSVLFASTSDNTVTVGQVLGLTMDNRAGSYFGAGSSWTSEAAVNNEAGSGFQSSHALQLSYSVEDGVISSFGSEAFCSFYNTVSFESSSDVQAAVNSLYNLDVLFSSGSGDSEQHYVVFGETASFESLAEHETSSQYITHVECMFNSVVEFEVKTYDWGRPVKPVGSDWSTDTPVVGVWVNEIYNGNKDWGES
adaptor of release VP1 B 202 Vibrio Cholerae MDKATLVKTIAYRMGNVKGQDTAIDFELALSIERLEGQEFVPWFLLSENNFFEGTAQENRIPVPRGFIREYEEGSLYLRRVAGTGKCLIKKSQDQLLKYEGMTGEPSHYSLTNQYFRIYPVPQEDFKVELLFYRKSSTLNVEDNPWYEYAAELLVAETIWAMLSARRDKMADYWKSVAADQMRRLTILDAERRLANQEIFMG
adaptor of release VP1 C 202 Vibrio Cholerae MDKATLVKTIAYRMGNVKGQDTAIDFELALSIERLEGQEFVPWFLLSENNFFEGTAQENRIPVPRGFIREYEEGSLYLRRVAGTGKCLIKKSQDQLLKYEGMTGEPSHYSLTNQYFRIYPVPQEDFKVELLFYRKSSTLNVEDNPWYEYAAELLVAETIWAMLSARRDKMADYWKSVAADQMRRLTILDAERRLANQEIFMG
nozzle of release VP1 E 521 Vibrio Cholerae MEVTHKQFDLSGFLPDQAPDTLKSGAISRGFNVKPTILGWEKSGGFRETNTAPTNEKDFIFFWSPAIGDNRWFSGGDKTVQQVEGNVVSDVSRTGGYTAAAAARWNAVNFNGVLLMNNELDSPQYLAASGKLEDFPNLPSNVRFRTVAVYKNFILGLGVNFGSGFLDDEIYWSHQADPGTMPPNWDYANAASDSGRTPLPSEGYCVTSEELGSMNIVYKSDSIWTMQLIGGQWIFRFENKFPGQGILNKKSVVSFEGKHFVVTQKDIIVHDGYQVRSVADKRVRNFFFTDMNSDYFERVFVVKDPRVAEVYVFYPSKNSVDGLCDRALVWNWRDDVWSLLNLRPLKHAAYGYEITGVSITWDNFVGGWESTGLWQADEDVAKYAPVLHYSFRDVPKLLAPTPQALFIDEEIEAVWEREDIVIGSISRDGVPYQDYERNKSVSSISFDVDTTEPFDVYIGYKGSLEDSVEWEFAGTVNPMEDKRLFCLLTAGLFSMRIISKAQTFILRSYKITYEFAGEMWA
portal of release VP1 K 581 Vibrio Cholerae MEILYTGASESLHSTILKALLERIDLGDTFISDNYTRWQATERYYMMYKIPNKKDKAAIEKWNKGDTDFKSLVMPYSYAQLMTAHAYMVNVFLNRDPIFQTDSLNGDGTERELALESMLQYQVKAGEMEPSLLVWFMDALRYGVGVLGDYWEEHVFHQTVFEVKKTRVVKGYEGCKTFNVMVYDFIPDPRVALCKYQEGEFFGRRLDLNVLDLKKGAKFGKYFNVEHAEALVAASKEEMYRRDPSIGQQRSLKDSTMTPKGKQVGDISCVEIFVRLVPKDWGLGDSEFPEMWVFTVADKKYIVAAEPVNTLDDKFPFHILECEIDGYMNKSRGLLEISAPMNDILTWLFDSHMYNKRQIMNNQFIGDPSALVVKDVESKEPGKFIRLRPIISQLPVTDVTAQNIQDVQVVERNMQRIVGVNDDVAGQSSPSSRRSATEFRGTTSFASSRLANLAYFFSVTGFRSLAKSLIVKTQQLYTVEMKVKVAGDNIKGAQSIIVKPEDISGQFDIMPVDGTLPVDRMAQAQFWMQIMSMVAGNPVLGAEYRLGDIFSYTARLAGLKGIDKMKIRILDDDQILALILA
portal of release VP1 L 581 Vibrio Cholerae MEILYTGASESLHSTILKALLERIDLGDTFISDNYTRWQATERYYMMYKIPNKKDKAAIEKWNKGDTDFKSLVMPYSYAQLMTAHAYMVNVFLNRDPIFQTDSLNGDGTERELALESMLQYQVKAGEMEPSLLVWFMDALRYGVGVLGDYWEEHVFHQTVFEVKKTRVVKGYEGCKTFNVMVYDFIPDPRVALCKYQEGEFFGRRLDLNVLDLKKGAKFGKYFNVEHAEALVAASKEEMYRRDPSIGQQRSLKDSTMTPKGKQVGDISCVEIFVRLVPKDWGLGDSEFPEMWVFTVADKKYIVAAEPVNTLDDKFPFHILECEIDGYMNKSRGLLEISAPMNDILTWLFDSHMYNKRQIMNNQFIGDPSALVVKDVESKEPGKFIRLRPIISQLPVTDVTAQNIQDVQVVERNMQRIVGVNDDVAGQSSPSSRRSATEFRGTTSFASSRLANLAYFFSVTGFRSLAKSLIVKTQQLYTVEMKVKVAGDNIKGAQSIIVKPEDISGQFDIMPVDGTLPVDRMAQAQFWMQIMSMVAGNPVLGAEYRLGDIFSYTARLAGLKGIDKMKIRILDDDQILALILA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-05-16
Deposition Author(s): Liu, H.R. , Pang, H.