8Z2E
Crystal structure of nanobody tnb04-1 with antibody 1f11 fab and sars-cov-2 rbd
PDB DOI: 10.2210/pdb8z2e/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos
Deposited: 2024-04-12 Deposition Author(s): Chen, J. , Dong, H.D. , Wang, X.Q. , Zhang, L.Q.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.3 Å
Crystal structure of nanobody tnb04-1 with antibody 1f11 fab and sars-cov-2 rbd
Chen, J. , Dong, H.D. , Wang, X.Q. , Zhang, L.Q.
Primary Citation of Related Structures: 8Z2E
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Tnb04-1 | B | 116 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos | EVQLQESGGGLVQPGGSLRLSCAASGSISTLNVMGWYRQAPGKQRELVARITLDGRPEYADSVKGRFTITKDGAQSTLYLQMNNLKPEDTAVYFCKLENGGFFYYWGQGTQVTVSS |
| Spike protein S1 | E | 217 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos | RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKHHHHHH |
| 1F11-H | H | 217 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos | EVQLVESGGGLVQPGGSLRLSCAASGITVSSNYMNWVRQAPGKGLEWVSLIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYHCARDLVVYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP |
| 1F11-L | L | 214 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 , Vicugna Pacos | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2024-04-12 Deposition Author(s): Chen, J. , Dong, H.D. , Wang, X.Q. , Zhang, L.Q.