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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8YVF

Cryo-em structure of carboxysomal midi-shell: assembly from csos4a/4b/1a/1b/1c/1d and csos2 c-terminal co-expression (t=9 q=12)

PDB DOI: 10.2210/pdb8yvf/pdb

Classification: STRUCTURAL PROTEIN
Organism(s): Halothiobacillus Neapolitanus

Deposited: 2024-03-28
Deposition Author(s): Basle, A. , Chriscoli, V. , Li, J.X. , Li, K. , Li, T.P. , Liu, L.N. , Marles-Wright, J. , Ng, P.C. , Wang, P. , Wang, S.M. , Zhang, Y.Z.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.99 Å

8yvf
Literature

Cryo-em structure of carboxysomal midi-shell: assembly from csos4a/4b/1a/1b/1c/1d and csos2 c-terminal co-expression (t=9 q=12)

Basle, A. , Chriscoli, V. , Li, J.X. , Li, K. , Li, T.P. , Liu, L.N. , Marles-Wright, J. , Ng, P.C. , Wang, P. , Wang, S.M. , Zhang, Y.Z.

Primary Citation of Related Structures: 8YVF


Proteins
Molecule Chains Sequence Length Organism Sequence
Major carboxysome shell protein CsoS1A 0 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A 2 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A 3 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A 5 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A 6 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A 7 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A 8 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A 9 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A A 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A B 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A C 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A D 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A E 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A F 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A G 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A H 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A I 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A J 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A K 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A L 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A M 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A N 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A O 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A P 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A Q 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A R 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A S 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A T 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A U 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Major carboxysome shell protein CsoS1A V 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Carboxysome shell vertex protein CsoS4A W 83 Halothiobacillus Neapolitanus MKIMQVEKTLVSTNRIADMGHKPLLVVWEKPGAPRQVAVDAIGCIPGDWVLCVGSSAAREAAGSKSYPSDLTIIGIIDQWNGE
Carboxysome shell vertex protein CsoS4A X 83 Halothiobacillus Neapolitanus MKIMQVEKTLVSTNRIADMGHKPLLVVWEKPGAPRQVAVDAIGCIPGDWVLCVGSSAAREAAGSKSYPSDLTIIGIIDQWNGE
Carboxysome shell vertex protein CsoS4A Y 83 Halothiobacillus Neapolitanus MKIMQVEKTLVSTNRIADMGHKPLLVVWEKPGAPRQVAVDAIGCIPGDWVLCVGSSAAREAAGSKSYPSDLTIIGIIDQWNGE
Carboxysome shell vertex protein CsoS4A Z 83 Halothiobacillus Neapolitanus MKIMQVEKTLVSTNRIADMGHKPLLVVWEKPGAPRQVAVDAIGCIPGDWVLCVGSSAAREAAGSKSYPSDLTIIGIIDQWNGE
Major carboxysome shell protein CsoS1A A1 98 Halothiobacillus Neapolitanus MADVTGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPQA
Carboxysome shell vertex protein CsoS4A 1 83 Halothiobacillus Neapolitanus MKIMQVEKTLVSTNRIADMGHKPLLVVWEKPGAPRQVAVDAIGCIPGDWVLCVGSSAAREAAGSKSYPSDLTIIGIIDQWNGE
Carboxysome shell vertex protein CsoS4A 4 83 Halothiobacillus Neapolitanus MKIMQVEKTLVSTNRIADMGHKPLLVVWEKPGAPRQVAVDAIGCIPGDWVLCVGSSAAREAAGSKSYPSDLTIIGIIDQWNGE
Carboxysome assembly protein CsoS2B A2 279 Halothiobacillus Neapolitanus MPFCTSTPEPEAQSTEQSLTCEGQIISGTSVDASDLVTGNEIGEQQLISGDAYVGAQQTGCLPTSPRFNQTGNVQSMGFKNTNQPEQNFAPGEVMPTDFSIQTPARSAQNRITGNDIAPSGRITGPGMLATGLITGTPEFRHAARELVGSPQPMAMAMANRNKAAQAPVVQPEVVATQEKPELVCAPRSDQMDRVSGEGKERCHITGDDWSVNKHITGTAGQWASGRNPSMRGNARVVETSAFANRNVPKPEKPGSKITGSSGNDTQGSLITYSGGARG
Carboxysome assembly protein CsoS2B A3 279 Halothiobacillus Neapolitanus MPFCTSTPEPEAQSTEQSLTCEGQIISGTSVDASDLVTGNEIGEQQLISGDAYVGAQQTGCLPTSPRFNQTGNVQSMGFKNTNQPEQNFAPGEVMPTDFSIQTPARSAQNRITGNDIAPSGRITGPGMLATGLITGTPEFRHAARELVGSPQPMAMAMANRNKAAQAPVVQPEVVATQEKPELVCAPRSDQMDRVSGEGKERCHITGDDWSVNKHITGTAGQWASGRNPSMRGNARVVETSAFANRNVPKPEKPGSKITGSSGNDTQGSLITYSGGARG
Carboxysome assembly protein CsoS2B A4 279 Halothiobacillus Neapolitanus MPFCTSTPEPEAQSTEQSLTCEGQIISGTSVDASDLVTGNEIGEQQLISGDAYVGAQQTGCLPTSPRFNQTGNVQSMGFKNTNQPEQNFAPGEVMPTDFSIQTPARSAQNRITGNDIAPSGRITGPGMLATGLITGTPEFRHAARELVGSPQPMAMAMANRNKAAQAPVVQPEVVATQEKPELVCAPRSDQMDRVSGEGKERCHITGDDWSVNKHITGTAGQWASGRNPSMRGNARVVETSAFANRNVPKPEKPGSKITGSSGNDTQGSLITYSGGARG
Carboxysome assembly protein CsoS2B A5 279 Halothiobacillus Neapolitanus MPFCTSTPEPEAQSTEQSLTCEGQIISGTSVDASDLVTGNEIGEQQLISGDAYVGAQQTGCLPTSPRFNQTGNVQSMGFKNTNQPEQNFAPGEVMPTDFSIQTPARSAQNRITGNDIAPSGRITGPGMLATGLITGTPEFRHAARELVGSPQPMAMAMANRNKAAQAPVVQPEVVATQEKPELVCAPRSDQMDRVSGEGKERCHITGDDWSVNKHITGTAGQWASGRNPSMRGNARVVETSAFANRNVPKPEKPGSKITGSSGNDTQGSLITYSGGARG
Carboxysome assembly protein CsoS2B A6 279 Halothiobacillus Neapolitanus MPFCTSTPEPEAQSTEQSLTCEGQIISGTSVDASDLVTGNEIGEQQLISGDAYVGAQQTGCLPTSPRFNQTGNVQSMGFKNTNQPEQNFAPGEVMPTDFSIQTPARSAQNRITGNDIAPSGRITGPGMLATGLITGTPEFRHAARELVGSPQPMAMAMANRNKAAQAPVVQPEVVATQEKPELVCAPRSDQMDRVSGEGKERCHITGDDWSVNKHITGTAGQWASGRNPSMRGNARVVETSAFANRNVPKPEKPGSKITGSSGNDTQGSLITYSGGARG
Carboxysome assembly protein CsoS2B A7 279 Halothiobacillus Neapolitanus MPFCTSTPEPEAQSTEQSLTCEGQIISGTSVDASDLVTGNEIGEQQLISGDAYVGAQQTGCLPTSPRFNQTGNVQSMGFKNTNQPEQNFAPGEVMPTDFSIQTPARSAQNRITGNDIAPSGRITGPGMLATGLITGTPEFRHAARELVGSPQPMAMAMANRNKAAQAPVVQPEVVATQEKPELVCAPRSDQMDRVSGEGKERCHITGDDWSVNKHITGTAGQWASGRNPSMRGNARVVETSAFANRNVPKPEKPGSKITGSSGNDTQGSLITYSGGARG
Carboxysome assembly protein CsoS2B X1 279 Halothiobacillus Neapolitanus MPFCTSTPEPEAQSTEQSLTCEGQIISGTSVDASDLVTGNEIGEQQLISGDAYVGAQQTGCLPTSPRFNQTGNVQSMGFKNTNQPEQNFAPGEVMPTDFSIQTPARSAQNRITGNDIAPSGRITGPGMLATGLITGTPEFRHAARELVGSPQPMAMAMANRNKAAQAPVVQPEVVATQEKPELVCAPRSDQMDRVSGEGKERCHITGDDWSVNKHITGTAGQWASGRNPSMRGNARVVETSAFANRNVPKPEKPGSKITGSSGNDTQGSLITYSGGARG
Carboxysome assembly protein CsoS2B X2 279 Halothiobacillus Neapolitanus MPFCTSTPEPEAQSTEQSLTCEGQIISGTSVDASDLVTGNEIGEQQLISGDAYVGAQQTGCLPTSPRFNQTGNVQSMGFKNTNQPEQNFAPGEVMPTDFSIQTPARSAQNRITGNDIAPSGRITGPGMLATGLITGTPEFRHAARELVGSPQPMAMAMANRNKAAQAPVVQPEVVATQEKPELVCAPRSDQMDRVSGEGKERCHITGDDWSVNKHITGTAGQWASGRNPSMRGNARVVETSAFANRNVPKPEKPGSKITGSSGNDTQGSLITYSGGARG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-03-28
Deposition Author(s): Basle, A. , Chriscoli, V. , Li, J.X. , Li, K. , Li, T.P. , Liu, L.N. , Marles-Wright, J. , Ng, P.C. , Wang, P. , Wang, S.M. , Zhang, Y.Z.