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FASTA Sequence PDB Format mmCIF Format
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8YS6

Helicobacter pylori oordabc in complex with napabucasin

PDB DOI: 10.2210/pdb8ys6/pdb

Classification: OXIDOREDUCTASE
Organism(s): Sulfitobacter Sp. Nas-14.1

Deposited: 2024-03-22
Deposition Author(s): Bi, H. , Gao, Y. , Lan, W.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.03 Å

8ys6
Literature

Helicobacter pylori oordabc in complex with napabucasin

Bi, H. , Gao, Y. , Lan, W.

Primary Citation of Related Structures: 8YS6


Proteins
Molecule Chains Sequence Length Organism Sequence
2-oxoglutarate:acceptor oxidoreductase D 113 Sulfitobacter Sp. Nas-14.1 MAKMSTPDGVAVWVNEDRCKGCDICVSVCPAGVLGMGIEKERVLGKVAKVAYPESCIGCVQCELHCPDFAIYVADRKDFKFAKVSKEAQERSEKVKANKYMLLEETILEGRGK
2-oxoglutarate:acceptor oxidoreductase F 113 Sulfitobacter Sp. Nas-14.1 MAKMSTPDGVAVWVNEDRCKGCDICVSVCPAGVLGMGIEKERVLGKVAKVAYPESCIGCVQCELHCPDFAIYVADRKDFKFAKVSKEAQERSEKVKANKYMLLEETILEGRGK
2-oxoglutarate synthase subunit alpha A 375 Sulfitobacter Sp. Nas-14.1 MREIISDGNELVAKAAIEVGCRFFGGYPITPSSDIMHAMSVALPKCGGHFIQMEDEISGISVSLGASMSGTKSMTASSGPGISLKVEQIGYSFMAEIPLVIADVMRSGPSTGMPTRVAQGDVNFLKHPIHGDFKAVALAPASLEEAYTETVRAFNLAEMLMTPVFLLMDETVGHMYGKVQIPDLEEVQKMTINRKEFVGDKKDYKPYGVAQDEPAVLNPFFKGYRYHVSGLHHGPIGFPTEDAKIGGDLIDRLFHKIESKQDIINENEEMDLEGAEIVIIAYGSVSLAVKEALKDYHKESKQKVGFFRPKTLWPSPAKRLKEIGDKYEKILVIELNKGQYLEEIERAMQRKVHFFGQANGRTISPKQIIAKLKEL
2-oxoglutarate synthase subunit alpha G 375 Sulfitobacter Sp. Nas-14.1 MREIISDGNELVAKAAIEVGCRFFGGYPITPSSDIMHAMSVALPKCGGHFIQMEDEISGISVSLGASMSGTKSMTASSGPGISLKVEQIGYSFMAEIPLVIADVMRSGPSTGMPTRVAQGDVNFLKHPIHGDFKAVALAPASLEEAYTETVRAFNLAEMLMTPVFLLMDETVGHMYGKVQIPDLEEVQKMTINRKEFVGDKKDYKPYGVAQDEPAVLNPFFKGYRYHVSGLHHGPIGFPTEDAKIGGDLIDRLFHKIESKQDIINENEEMDLEGAEIVIIAYGSVSLAVKEALKDYHKESKQKVGFFRPKTLWPSPAKRLKEIGDKYEKILVIELNKGQYLEEIERAMQRKVHFFGQANGRTISPKQIIAKLKEL
2-oxoglutarate ferredoxin oxidoreductase subunit beta C 273 Sulfitobacter Sp. Nas-14.1 MAFNYDEYLRVDKIPTLWCWGCGDGVILKSIIRTIDALGWKMDDVCLVSGIGCSGRMSSYVNCNTVHTTHGRAVAYATGIKMANPSKHVIVVSGDGDGFAIGGNHTMHACRRNIDLNFILVNNFIYGLTNSQTSPTTPNGMWTVTAQWGNIDNQFDPCALTTAAGASFVARESVLDPQKLEKVLKEGFSHKGFSFFDVHSNCHINLGRKNKMGEASQMLKWMESRLVSKRQFEAMSPEERVDKFPTGVLRHDTDRKEYCEAYQEIIEKAQGKQ
2-oxoglutarate ferredoxin oxidoreductase subunit beta H 273 Sulfitobacter Sp. Nas-14.1 MAFNYDEYLRVDKIPTLWCWGCGDGVILKSIIRTIDALGWKMDDVCLVSGIGCSGRMSSYVNCNTVHTTHGRAVAYATGIKMANPSKHVIVVSGDGDGFAIGGNHTMHACRRNIDLNFILVNNFIYGLTNSQTSPTTPNGMWTVTAQWGNIDNQFDPCALTTAAGASFVARESVLDPQKLEKVLKEGFSHKGFSFFDVHSNCHINLGRKNKMGEASQMLKWMESRLVSKRQFEAMSPEERVDKFPTGVLRHDTDRKEYCEAYQEIIEKAQGKQ
2-oxoglutarate:acceptor oxidoreductase B 186 Sulfitobacter Sp. Nas-14.1 MEAQLRFTGVGGQGVLLAGEILAEAKIVSGGYGTKTSTYTSQVRGGPTKVDILLDKDEIIFPYAKEGEIDFMLSVAQISYNQFKSDIKQGGIVVIDPNLVTPTKEDEEKYQIYKIPIISIAKDEVGNIITQSVVALAITVELTKCVEENIVLDTMLKKVPAKVADTNKKAFEIGKKHALEALKVRA
2-oxoglutarate:acceptor oxidoreductase I 186 Sulfitobacter Sp. Nas-14.1 MEAQLRFTGVGGQGVLLAGEILAEAKIVSGGYGTKTSTYTSQVRGGPTKVDILLDKDEIIFPYAKEGEIDFMLSVAQISYNQFKSDIKQGGIVVIDPNLVTPTKEDEEKYQIYKIPIISIAKDEVGNIITQSVVALAITVELTKCVEENIVLDTMLKKVPAKVADTNKKAFEIGKKHALEALKVRA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-03-22
Deposition Author(s): Bi, H. , Gao, Y. , Lan, W.