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8YS5

Cryo-em structure of the helicobacter pylori oordabc complex in the apo-form

PDB DOI: 10.2210/pdb8ys5/pdb

Classification: OXIDOREDUCTASE
Organism(s): Helicobacter Pylori

Deposited: 2024-03-22
Deposition Author(s): Bi, H. , Gao, Y. , Lan, W.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.95 Å

8ys5
Literature

Cryo-em structure of the helicobacter pylori oordabc complex in the apo-form

Bi, H. , Gao, Y. , Lan, W.

Primary Citation of Related Structures: 8YS5


Proteins
Molecule Chains Sequence Length Organism Sequence
2-oxoglutarate:acceptor oxidoreductase D 113 Helicobacter Pylori MAKMSTPDGVAVWVNEDRCKGCDICVSVCPAGVLGMGIEKERVLGKVAKVAYPESCIGCVQCELHCPDFAIYVADRKDFKFAKVSKEAQERSEKVKANKYMLLEETILEGRGK
2-oxoglutarate:acceptor oxidoreductase F 113 Helicobacter Pylori MAKMSTPDGVAVWVNEDRCKGCDICVSVCPAGVLGMGIEKERVLGKVAKVAYPESCIGCVQCELHCPDFAIYVADRKDFKFAKVSKEAQERSEKVKANKYMLLEETILEGRGK
2-oxoglutarate synthase subunit alpha A 375 Helicobacter Pylori MREIISDGNELVAKAAIEVGCRFFGGYPITPSSDIMHAMSVALPKCGGHFIQMEDEISGISVSLGASMSGTKSMTASSGPGISLKVEQIGYSFMAEIPLVIADVMRSGPSTGMPTRVAQGDVNFLKHPIHGDFKAVALAPASLEEAYTETVRAFNLAEMLMTPVFLLMDETVGHMYGKVQIPDLEEVQKMTINRKEFVGDKKDYKPYGVAQDEPAVLNPFFKGYRYHVSGLHHGPIGFPTEDAKIGGDLIDRLFHKIESKQDIINENEEMDLEGAEIVIIAYGSVSLAVKEALKDYHKESKQKVGFFRPKTLWPSPAKRLKEIGDKYEKILVIELNKGQYLEEIERAMQRKVHFFGQANGRTISPKQIIAKLKEL
2-oxoglutarate synthase subunit alpha G 375 Helicobacter Pylori MREIISDGNELVAKAAIEVGCRFFGGYPITPSSDIMHAMSVALPKCGGHFIQMEDEISGISVSLGASMSGTKSMTASSGPGISLKVEQIGYSFMAEIPLVIADVMRSGPSTGMPTRVAQGDVNFLKHPIHGDFKAVALAPASLEEAYTETVRAFNLAEMLMTPVFLLMDETVGHMYGKVQIPDLEEVQKMTINRKEFVGDKKDYKPYGVAQDEPAVLNPFFKGYRYHVSGLHHGPIGFPTEDAKIGGDLIDRLFHKIESKQDIINENEEMDLEGAEIVIIAYGSVSLAVKEALKDYHKESKQKVGFFRPKTLWPSPAKRLKEIGDKYEKILVIELNKGQYLEEIERAMQRKVHFFGQANGRTISPKQIIAKLKEL
2-oxoglutarate ferredoxin oxidoreductase subunit beta C 273 Helicobacter Pylori MAFNYDEYLRVDKIPTLWCWGCGDGVILKSIIRTIDALGWKMDDVCLVSGIGCSGRMSSYVNCNTVHTTHGRAVAYATGIKMANPSKHVIVVSGDGDGFAIGGNHTMHACRRNIDLNFILVNNFIYGLTNSQTSPTTPNGMWTVTAQWGNIDNQFDPCALTTAAGASFVARESVLDPQKLEKVLKEGFSHKGFSFFDVHSNCHINLGRKNKMGEASQMLKWMESRLVSKRQFEAMSPEERVDKFPTGVLRHDTDRKEYCEAYQEIIEKAQGKQ
2-oxoglutarate ferredoxin oxidoreductase subunit beta H 273 Helicobacter Pylori MAFNYDEYLRVDKIPTLWCWGCGDGVILKSIIRTIDALGWKMDDVCLVSGIGCSGRMSSYVNCNTVHTTHGRAVAYATGIKMANPSKHVIVVSGDGDGFAIGGNHTMHACRRNIDLNFILVNNFIYGLTNSQTSPTTPNGMWTVTAQWGNIDNQFDPCALTTAAGASFVARESVLDPQKLEKVLKEGFSHKGFSFFDVHSNCHINLGRKNKMGEASQMLKWMESRLVSKRQFEAMSPEERVDKFPTGVLRHDTDRKEYCEAYQEIIEKAQGKQ
2-oxoglutarate:acceptor oxidoreductase B 186 Helicobacter Pylori MEAQLRFTGVGGQGVLLAGEILAEAKIVSGGYGTKTSTYTSQVRGGPTKVDILLDKDEIIFPYAKEGEIDFMLSVAQISYNQFKSDIKQGGIVVIDPNLVTPTKEDEEKYQIYKIPIISIAKDEVGNIITQSVVALAITVELTKCVEENIVLDTMLKKVPAKVADTNKKAFEIGKKHALEALKVRA
2-oxoglutarate:acceptor oxidoreductase I 186 Helicobacter Pylori MEAQLRFTGVGGQGVLLAGEILAEAKIVSGGYGTKTSTYTSQVRGGPTKVDILLDKDEIIFPYAKEGEIDFMLSVAQISYNQFKSDIKQGGIVVIDPNLVTPTKEDEEKYQIYKIPIISIAKDEVGNIITQSVVALAITVELTKCVEENIVLDTMLKKVPAKVADTNKKAFEIGKKHALEALKVRA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-03-22
Deposition Author(s): Bi, H. , Gao, Y. , Lan, W.