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FASTA Sequence PDB Format mmCIF Format
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8YGS

Cryo-em structure of simian rotavirus sa11 vp4 in complex with nab 7h13

PDB DOI: 10.2210/pdb8ygs/pdb

Classification: VIRUS
Organism(s): Mus Musculus , Rotavirus A

Deposited: 2024-02-26
Deposition Author(s): Ge, S. , Huang, Y. , Li, S. , Sun, H. , Xia, N. , Zheng, Q.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.47 Å

Literature

Cryo-em structure of simian rotavirus sa11 vp4 in complex with nab 7h13

Ge, S. , Huang, Y. , Li, S. , Sun, H. , Xia, N. , Zheng, Q.

Primary Citation of Related Structures: 8YGS


Proteins
Molecule Chains Sequence Length Organism Sequence
Outer capsid protein VP4 A 581 Mus Musculus , Rotavirus A GYKMASLIYRQLLTNSYTVDLSDEIQEIGSTKSQNVTINPGPFAQTGYAPVNWGPGEINDSTTVEPLLDGPYQPTTFNPPVDYWMLLAPTTPGVIVEGTNNTDRWLATILIEPNVQSENRTYTIFGIQEQLTVSNTSQDQWKFIDVVKTTANGSIGQYGPLLSSPKLYAVMKHNEKLYTYEGQTPNARTAHYSTTNYDSVNMTAFCDFYIIPRSEESKCTEYINNGLPPIQNTRNVVPLSLTARDVIHYRAQANEDIVISKTSLWKEMQYNRDITIRFKFANTIIKSGGLGYKWSEISFKPANYQYTYTRDGEEVTAHTTCSVNGVNDFSFNGGSLPTDFVVSKFEVIKENSYVYIDYWDDSQAFRNVVYVRSLAANLNSVMCTGGSYNFSLPVGQWPVLTGGAVSLHSAGVTLSTQFTDFVSLNSLRFRFRLAVEEPHFKLTRTRLSRLYGLPAANPNNGKEYYEIAGRFSLISLVPSNHDYQTPIANSVTVRQDLERQLGELREEFNALSQEIAMSQLIDLALLPLDMFSMFSGIKSTIDAAKSMATNVMKKFKKSGLANSVSTLTDSLSDAASSISRG
Outer capsid protein VP4 B 581 Mus Musculus , Rotavirus A GYKMASLIYRQLLTNSYTVDLSDEIQEIGSTKSQNVTINPGPFAQTGYAPVNWGPGEINDSTTVEPLLDGPYQPTTFNPPVDYWMLLAPTTPGVIVEGTNNTDRWLATILIEPNVQSENRTYTIFGIQEQLTVSNTSQDQWKFIDVVKTTANGSIGQYGPLLSSPKLYAVMKHNEKLYTYEGQTPNARTAHYSTTNYDSVNMTAFCDFYIIPRSEESKCTEYINNGLPPIQNTRNVVPLSLTARDVIHYRAQANEDIVISKTSLWKEMQYNRDITIRFKFANTIIKSGGLGYKWSEISFKPANYQYTYTRDGEEVTAHTTCSVNGVNDFSFNGGSLPTDFVVSKFEVIKENSYVYIDYWDDSQAFRNVVYVRSLAANLNSVMCTGGSYNFSLPVGQWPVLTGGAVSLHSAGVTLSTQFTDFVSLNSLRFRFRLAVEEPHFKLTRTRLSRLYGLPAANPNNGKEYYEIAGRFSLISLVPSNHDYQTPIANSVTVRQDLERQLGELREEFNALSQEIAMSQLIDLALLPLDMFSMFSGIKSTIDAAKSMATNVMKKFKKSGLANSVSTLTDSLSDAASSISRG
Outer capsid protein VP4 C 581 Mus Musculus , Rotavirus A GYKMASLIYRQLLTNSYTVDLSDEIQEIGSTKSQNVTINPGPFAQTGYAPVNWGPGEINDSTTVEPLLDGPYQPTTFNPPVDYWMLLAPTTPGVIVEGTNNTDRWLATILIEPNVQSENRTYTIFGIQEQLTVSNTSQDQWKFIDVAKTTANGSIEQYGPLLSSPKLYAVMKHNKKLYTYEGQTPNARTGHYSTTNYDSVNMTAFCDFYIIPRSEESKCTEYINNGLPPIQNTRNVVPLSLTARDVIHYRAQANEDIVISKTSLWKEMQYNRDITIRFKFANTIIKSGGLGYKWSEISFKPANYQYTYTRDGEEVTAHTTCSVNGVNDFSFNGGSLPTDFVVSKFEVIKENSYVYIDYWDDSQAFRNVVYVRSLAANLNSVMCTGGSYNFSLPVGQWPVLTGGAVSLHSAGVTLSTQFTDFVSLNSLRFRFRLAVEEPHFKLTRTRLSRLYGLPAANPNNGKEYYEIAGRFSLISLVPSNHDYQTPIANSVTVRQDLERQLGELREEFNALSQEIAMSQLIDLALLPLDMFSMFSGIKSTIDAAKSMATNVMKKFKKSGLANSVSTLTDSLSDAASSISRG
Antibody 7H13 heavy chain H 116 Mus Musculus , Rotavirus A QVQLKESGPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWNIGSTDYNSALKSRLSISKDNSQSQVFLKLNSLQTDDAAIYYCARNSGFDLFDFWGQGTTLTVS
Antibody 7H13 heavy chain M 116 Mus Musculus , Rotavirus A QVQLKESGPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWNIGSTDYNSALKSRLSISKDNSQSQVFLKLNSLQTDDAAIYYCARNSGFDLFDFWGQGTTLTVS
Antibody 7H13 light chain L 107 Mus Musculus , Rotavirus A DIVMTQSHKFMSTSVGDRVSITCKASQDVTSAVAWYQQKPGQSPKLLISSASYRYTGVPDRFSGSGSGTDFTFTISSVQAEDLAVYYCQQHYSTPPTFGAGTKLELK
Antibody 7H13 light chain N 107 Mus Musculus , Rotavirus A DIVMTQSHKFMSTSVGDRVSITCKASQDVTSAVAWYQQKPGQSPKLLISSASYRYTGVPDRFSGSGSGTDFTFTISSVQAEDLAVYYCQQHYSTPPTFGAGTKLELK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-02-26
Deposition Author(s): Ge, S. , Huang, Y. , Li, S. , Sun, H. , Xia, N. , Zheng, Q.