8YF2
Cryo-em structure of sars-cov-2 prototype rbd in complex with raccoon dog ace2 (local refinement)
PDB DOI: 10.2210/pdb8yf2/pdb
Classification: VIRAL PROTEIN/HYDROLASE Organism(s): Nyctereutes Procyonoides , Severe Acute Respiratory Syndrome Coronavirus 2
Deposited: 2024-02-23 Deposition Author(s): Gao, G.F. , Li, L.J. , Luo, C.L. , Qi, J.X.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.64 Å
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Spike protein S1 | B | 229 | Nyctereutes Procyonoides , Severe Acute Respiratory Syndrome Coronavirus 2 | RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFHHHHHH |
| Angiotensin-converting enzyme | A | 605 | Nyctereutes Procyonoides , Severe Acute Respiratory Syndrome Coronavirus 2 | QSTEDLVNTFLEKFNYEAEELSYQSSLASWNYNTNITDENLQKMNNAGAKWSAFYEEQSKLAKTYPLEEIQDSTVKRQLRALQHSGSSVLSADKNQRLNTILNSMSTIYSTGKACNPSNPQECLLLEPGLDDIMENSKDYNERLWAWEGWRSEVGKQLRPLYEEYVALKNEMARANNYEDYGDYWRGDYEEEWENGYNYSRNQLIDDVEHTFTQIMPLYQHLHAYVRTKLMDTYPSYISPTGCLPAHLLGDMWGRFWTNLYPLTVPFGQKPNIDVTNAMVNQSWDARKIFKEAEKFFVSVGLPNMTQGFWENSMLTEPSDSWKVVCHPTAWDLGRGDFRIKMCTKVTMDDFLTAHHEMGHIQYDMAYAAQPFLLRNGANEGFHEAVGEIMSLSAATPNHLKNIGLLPPSFFEDSETEINFLLKQALTIVGTLPFTYMLEKWRWMVFKGEIPKDQWMKTWWEMKRNIVGVVEPVPHDETYCDPASLFHVANDYSFIRYYTRTIYQFQFQEALCQIAKHEGPLHKCDISNSSEAGQKLLEMLKLGKSKPWTYALEIVVGAKNMDVRPLLNYFEPLFTWLKEQNRNSFVGWNTDWSPYADQSHHHHHH |
Experimental Data
Method: ELECTRON MICROSCOPY