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FASTA Sequence PDB Format mmCIF Format
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8XEJ

Cryo-em structure of human xkr8-basigin complex in lipid nanodisc

PDB DOI: 10.2210/pdb8xej/pdb

Classification: LIPID TRANSPORT
Organism(s): Salmonella Enterica , Halomicronema Hongdechloris

Deposited: 2023-12-12
Deposition Author(s): Kanai, R.K. , Kikkawa, M.K. , Nagata, S.N. , Sakuragi, T.S. , Toyoshima, C.T.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.66 Å

8xej
Literature

Cryo-em structure of human xkr8-basigin complex in lipid nanodisc

Kanai, R.K. , Kikkawa, M.K. , Nagata, S.N. , Sakuragi, T.S. , Toyoshima, C.T.

Primary Citation of Related Structures: 8XEJ


Proteins
Molecule Chains Sequence Length Organism Sequence
Isoform 2 of Basigin B 176 Salmonella Enterica , Halomicronema Hongdechloris AGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMQGSESRFFVSSSQGRSELHIENLNMEADPGQYRCQGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRRKPEDVLDDDDAGSAPLKSSGQHQNDKGKNVRQRNSSDYKDDDDK
XK-related protein 8 X 405 Salmonella Enterica , Halomicronema Hongdechloris MPWSSRGALLRDLVLGVLGTAAFLLDLGTDLWAAVQYALGGRYLWAALVLALLGLASVALQLFSWLWLRADPAGLHGSQPPRRCLALLHLLQLGYLYRCVQELRQGLLVWQQEEPSEFDLAYADFLALDISMLRLFETFLETAPQLTLVLAIMLQSGRAEYYQWVGICTSFLGISWALLDYHRALRTCLPSKPLLGLGSSVIYFLWNLLLLWPRVLAVALFSALFPSYVALHFLGLWLVLLLWVWLQGTDFMPDPSSEWLYRVTVATILYFSWFNVAEGRTRGRAIIHFAFLLSDSILLVATWVTHSSWLPSGIPLQLWLPVGCGCFFLGLALRLVYYHWLHPSCCWKPDPDQVDGARSLLSPEGYQLPQNRRMTHLAQKFFPKAKDEAASPVKGVDEFENLYFQ
Fab heavy chain H 217 Salmonella Enterica , Halomicronema Hongdechloris QSVEESGGRLVTPGTPLTLTCTVSGFSLSDYAMNWVRQAPGKGLEWIGIIYASGSRYYASWAKGRFTISKTSTTVDLKITSPTTEDTATYFCARYYAGSDIWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
Fab light chain L 218 Salmonella Enterica , Halomicronema Hongdechloris ADVVMTQTPSSVSAAVGGTVTINCQASQSISAYLAWYQQKPGQPPKLLIYDASDLASGVSSRFKGSGSGTQFTLTISALECADAATYYCQSYYAIITYGAAFGGGTEVVVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDCTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-12-12
Deposition Author(s): Kanai, R.K. , Kikkawa, M.K. , Nagata, S.N. , Sakuragi, T.S. , Toyoshima, C.T.