8WEY
Psi-lhci of the red alga cyanidium caldarium rk-1 (nies-2137)
PDB DOI: 10.2210/pdb8wey/pdb
Classification: PHOTOSYNTHESIS Organism(s): Cyanidium Caldarium
Deposited: 2023-09-19 Deposition Author(s): Hamaguchi, T. , Kato, K. , Kawakami, K. , Nagao, R. , Nakajima, Y. , Shen, J.R. , Yonekura, K.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 1.92 Å
Psi-lhci of the red alga cyanidium caldarium rk-1 (nies-2137)
Hamaguchi, T. , Kato, K. , Kawakami, K. , Nagao, R. , Nakajima, Y. , Shen, J.R. , Yonekura, K.
Primary Citation of Related Structures: 8WEY
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Photosystem I P700 chlorophyll a apoprotein A1 | A | 748 | Cyanidium Caldarium | MTLTTDKKVKVVVDRDVVATSFEKWAKPGHFSRSLAKGPKTTTWIWNLHADAHDFDSHTSSLEEVSRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYVAWLSNPTGIKPSAQVVWPIVGQQILNADVGGGIQGIQITSGLFQLWRASGIVNELQLYVTAIGGLVMAGLMMFAGWFHYHKAAPKLEWFQNVESMLNHHLAGLLGLGSLSWAGHQIHVSLPVNKLLDAGVAPSSIPLPHEFILNRNLMAELYPSFQQGLAPFFTLNWKQYSDILTFKGGLSPVTGGLWLTDVAHHHLAIAVLFIVAGHMYRTNWGIGHSMKQLLEAHKGPLTGEGHKGLYEVLTTSWHANLAINLAMLGSLSIIVAHHMYSMPPYPYLATDYPTQLSLFTHHMWIGGFCIVGAGAHAAIYMVRDYSPTVNYNNVLDRMIRHRDAIISHLNWVCIFLGTHSFGLYIHNDTMRALGRAQDMFSDTAIQLQPVLAQWIQQIHTLAPGNTAVNALATASYAFGADTVTVGSKIAMMPIKLGTADFMVHHIHAFTIHVTVLILLKGVLFARNSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNALSVVIFHFSWKMQSDVWGTVSSNGTVSHITGGNFAQSAITINGWLRDFLWAQASQVIQSYGSSLSAYGLMFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPSIAPRALSITQGRAVGVAHYLLGGIATTWAFFLARIISVG |
| Photosystem I reaction center subunit XI | L | 141 | Cyanidium Caldarium | MSDYIKPYNNDPFVGHLATPINSSSLTRGYLAQLPIYRSGLSPFLRGLEIGMAHGYFLIGPFVELGPLRNTEMKYLAGLLSAVGLVVILTLGMLLYGYVSFTNDSQDVESLEGWRQLASGFLLGAVGGAGFAYLLIYSFIL |
| Photosystem I reaction center subunit XII | M | 28 | Cyanidium Caldarium | MITDNQVFVALIMALVCGYLAVKLAAQL |
| Photosystem I subunit O | O | 155 | Cyanidium Caldarium | MYGFVSVLPVASGVQRGQFACTSLKGFHGRVARFQQARLPSAGRARSVGASSLRMFEISDGEQYPLNPAVILIAIIGWSAAAAVPSNIPVLGGTGLTQAFLASIQRLLAQYPTGPKLDDPFWFYLVVYHVGLFALLIFGQIGYAGYARGTYKRSS |
| Lhcr1 | 1 | 214 | Cyanidium Caldarium | MYAFVSAVPLAQRSKLCLKKTNGRSLNRDCAFGYGTLRMEQSPAMPFLSKPPNLSPDMPGYRGFDPLRLSDAFDVNWLLEGEVKNGRVAMLACLHFFVTEYYQFPFYAGAPKLAAPAHDYFVKSGAMIQILVFIGFLEMVLHRGKVLYSDMEWKGRKPGELGFNPLNLPNDKAMKDREINNGRLAMLGFAGIIHGEFLNGKMPIEQITNFQPLQ |
| Lhcr1 | 4 | 214 | Cyanidium Caldarium | MYAFVSAVPLAQRSKLCLKKTNGRSLNRDCAFGYGTLRMEQSPAMPFLSKPPNLSPDMPGYRGFDPLRLSDAFDVNWLLEGEVKNGRVAMLACLHFFVTEYYQFPFYAGAPKLAAPAHDYFVKSGAMIQILVFIGFLEMVLHRGKVLYSDMEWKGRKPGELGFNPLNLPNDKAMKDREINNGRLAMLGFAGIIHGEFLNGKMPIEQITNFQPLQ |
| Lhcr2 | 2 | 222 | Cyanidium Caldarium | MAFISALSCASLKTGVVGRKVCGLKGAAAGLRMQAPSGAAMPSMPFLKRPSKLDGSLPGGEGCFDPLGFTEVFSLEWMREAEVKHCRVAMLAVLGVIAQEFGTLDFYHAQSKLQLSPDLHNQFVQNGALQQVLLFVCAWEFFVGLPALIESLEGRREPGYFGFDPLKLGGTYGSAQWKRMAAGELRNGRLAMIAFGGFFHQQLLTKQGIIEQLTHFSPLKSS |
| Lhcr2 | 5 | 222 | Cyanidium Caldarium | MAFISALSCASLKTGVVGRKVCGLKGAAAGLRMQAPSGAAMPSMPFLKRPSKLDGSLPGGEGCFDPLGFTEVFSLEWMREAEVKHCRVAMLAVLGVIAQEFGTLDFYHAQSKLQLSPDLHNQFVQNGALQQVLLFVCAWEFFVGLPALIESLEGRREPGYFGFDPLKLGGTYGSAQWKRMAAGELRNGRLAMIAFGGFFHQQLLTKQGIIEQLTHFSPLKSS |
| Lhcr3 | 3 | 219 | Cyanidium Caldarium | MFVWTSTWVAGGVLGSVSQRRGVCVSRQLRMTEAARDSGTSRSVPFVPAPAAVRKSGLAGSEAEFDPLQITSYLPISWMRESEVKHGRIAMLAFVGTLAQQAYQFPWYKGAPTTLVGAHDHFVTTALAQILLFTSAFEILAGVPAAIQTVRGSGRLPGYYGFDPLGLWGKDEASRKRMELAEVKNGRLAMIAMLALWHQEALSGGMGVIEQLVKQKFTP |
| Photosystem I P700 chlorophyll a apoprotein A2 | B | 732 | Cyanidium Caldarium | MTTKFPKFSQALASDPTTRRIWYGIATAHDFETHDGMTEENLYQKIFASHFGHLALIFLWTSGNLFHVAWQGNFEQWIANPLKTKPLAHAIWDPHFGQAALKAFTRGETVANISYSGLYHWWYTIGLRNNVELYSGALGLLVLSAVFLLAGWLHIQPKFKPSLSWFKNNESRLNHHLAGLFGVSSLAWTGHLVHVAIPASRGQHVGWDNFISVAPHPAGLQPFFTGNWSVYAQSPDSMQHVFGTNQGAGTAILTFLGGFHPQTQSLWLTDMAHHHLAIAVIFIVAGHMYRTNFGIGHNLKTILEAHRPPSGRLGKGHIGIYQTLTNSLHFQLGLALACLSVVTSLVAQHMYAMPPYAYMAYDYVTQAALYTHHQYIAGLLIVGAFAHGAIFFIRDYDPEQNQDNVLARMLTHKEAIISHLSWVSLFLGFHTLGLYVHNDVVVAFGNPEKQILIEPIFAQWIQATSGKALYGFHVLLSSSTSNATTAAQQLWLPGWLEAINNESNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLAMFWMLNTIGWITFYWHWKHLSLWQGNVAQFNESSTYLMGWLRDYLWLNSSPLINGYNPYGMNSLSVWAWMFLFAHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIKWKDKPVALSIVQARLVGLVHFTVGYILTYAAFVIASTAGKFS |
| Photosystem I iron-sulfur center | C | 81 | Cyanidium Caldarium | MAHTVKIYDNCIGCTQCVRACPLDVLEMVPWDGCKAGQMASAPRTEDCVGCKRCETACPTDFLSIRVYLGGETTRSMGLAY |
| Photosystem I reaction center subunit II | D | 139 | Cyanidium Caldarium | MLNLKMPSPNFLGSTGGWLRCAETEEKYAMTWSSNREHVFEMPTGGAATMNAGDNLLYLARKEQALALATQLRTQFKIQDYKIYRIFPSGEVQYLHPKDGVLPYLVNEGREQVGRIKATIGKNVNPAQVKFTSKATYDR |
| Photosystem I reaction center subunit IV | E | 61 | Cyanidium Caldarium | MLKKGSLVKILRPESYWFNEVGTVVSVETSKVLYPVLVRFEKVNYSGLNSTSFALEELQEI |
| Photosystem I reaction center subunit III | F | 178 | Cyanidium Caldarium | MKLSRLFILACMCVCVDGATADVLTTCQQNEAFHKREANEIRQLQNRQSKYDANSGGYLALQAQIDQVHKRFDKYGELLCGQDGLPHLITDGDWRHAREFTIPAILFLYITGWIGWVGRSYLQYTKQTKNPTEQEIILDLPMAFKYMLSGFLWPLSAWQEYRSGKLLAKEDEISVSPR |
| Photosystem I reaction center subunit VIII | I | 32 | Cyanidium Caldarium | MSASYLPSILVPTVGLILPFATMAILFVAIEK |
| Photosystem I reaction center subunit IX | J | 38 | Cyanidium Caldarium | MNLKKYLSTAPVVATLWLFLTAGILIELNRFYPDSLFY |
| Photosystem I reaction center subunit X | K | 68 | Cyanidium Caldarium | MIQFPSSIPVIMVISNLLALAIGRYAIQNPSNETPIIGLNLAQLVATTSFGHIIGVATILGLSNMGII |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2023-09-19 Deposition Author(s): Hamaguchi, T. , Kato, K. , Kawakami, K. , Nagao, R. , Nakajima, Y. , Shen, J.R. , Yonekura, K.