PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8VUO

Crystal structure of sars-cov-2 nsp16/nsp10 in complex with cap-1 rna

PDB DOI: 10.2210/pdb8vuo/pdb

Classification: VIRAL PROTEIN
Organism(s): Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2024-01-29
Deposition Author(s): Gupta, Y.K. , Misra, A. , Rahisuddin, R.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.39 Å

8vuo
Literature

Crystal structure of sars-cov-2 nsp16/nsp10 in complex with cap-1 rna

Gupta, Y.K. , Misra, A. , Rahisuddin, R.

Primary Citation of Related Structures: 8VUO


Proteins
Molecule Chains Sequence Length Organism Sequence
2'-O-methyltransferase A 298 Severe Acute Respiratory Syndrome Coronavirus 2 SSQAWQPGVAMPNLYKMQRMLLEKCDLQNYGDSATLPKGIMMNVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVHTANKWDLIISDMYDPKTKNVTKENDSKEGFFTYICGFIQQKLALGGSVAIKITEHSWNADLYKLMGHFAWWTAFVTNVNASSSEAFLIGCNYLGKPREQIDGYVMHANYIFWRNTNPIQLSSYSLFDMSKFPLKLRGTAVMSLKEGQINDMILSLLSKGRLIIRENNRVVISSDVLVNN
2'-O-methyltransferase C 298 Severe Acute Respiratory Syndrome Coronavirus 2 SSQAWQPGVAMPNLYKMQRMLLEKCDLQNYGDSATLPKGIMMNVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVHTANKWDLIISDMYDPKTKNVTKENDSKEGFFTYICGFIQQKLALGGSVAIKITEHSWNADLYKLMGHFAWWTAFVTNVNASSSEAFLIGCNYLGKPREQIDGYVMHANYIFWRNTNPIQLSSYSLFDMSKFPLKLRGTAVMSLKEGQINDMILSLLSKGRLIIRENNRVVISSDVLVNN
Non-structural protein 10 B 139 Severe Acute Respiratory Syndrome Coronavirus 2 AGNATEVPANSTVLSFCAFAVDAAKAYKDYLASGGQPITNCVKMLCTHTGTGQAITVTPEANMDQESFGGASCCLYCRCHIDHPNPKGFCDLKGKYVQIPTTCANDPVGFTLKNTVCTVCGMWKGYGCSCDQLREPMLQ
Non-structural protein 10 D 139 Severe Acute Respiratory Syndrome Coronavirus 2 AGNATEVPANSTVLSFCAFAVDAAKAYKDYLASGGQPITNCVKMLCTHTGTGQAITVTPEANMDQESFGGASCCLYCRCHIDHPNPKGFCDLKGKYVQIPTTCANDPVGFTLKNTVCTVCGMWKGYGCSCDQLREPMLQ

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(*AP*UP*UP*AP*AP*AP*GP*GP*UP*U)-3') e 10 NA AUUAAAGGUU
RNA (5'-R(*AP*UP*UP*AP*AP*AP*GP*GP*UP*U)-3') f 10 NA AUUAAAGGUU
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-01-29
Deposition Author(s): Gupta, Y.K. , Misra, A. , Rahisuddin, R.