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FASTA Sequence PDB Format mmCIF Format
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8VHX

Cryo-em of neck of bacteriophage chi

PDB DOI: 10.2210/pdb8vhx/pdb

Classification: VIRUS
Organism(s): Chivirus Chi

Deposited: 2024-01-02
Deposition Author(s): Egelman, E.H. , Esteves, N.C. , Scharf, B.E. , Sonani, R.R.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.9 Å

8vhx
Literature

Cryo-em of neck of bacteriophage chi

Egelman, E.H. , Esteves, N.C. , Scharf, B.E. , Sonani, R.R.

Primary Citation of Related Structures: 8VHX


Proteins
Molecule Chains Sequence Length Organism Sequence
Neck 1 A 84 Chivirus Chi MTPEECRAQYRLMLKEAMDAYHQLNLGGSVRVVVDQNSERVEYTAANRQSLWAYIVRLQNAINSDNPCAAFMGLPSSPAGFLFP
Neck 1 B 84 Chivirus Chi MTPEECRAQYRLMLKEAMDAYHQLNLGGSVRVVVDQNSERVEYTAANRQSLWAYIVRLQNAINSDNPCAAFMGLPSSPAGFLFP
Tail terminator C 167 Chivirus Chi MSQRLDILKALTAHLEQITIANGYAYDLKGKVYRGRDRFGADFTSRLPIVSILEAKATDYGSFANEEQTVRMDDWVLLVQGWVKDDPRNPTDPAYELLAEVEKRLAMLVAKDEQGQPMYPALYRLGGKIAKLTLAQPVVRPPEDGLSDTAFFFLPVRVGLKVDIRNP
Portal D 560 Chivirus Chi MTEKKRSTTQRAKKAAKTADVATLDATPQNPSALGGGLEGAERNTREMFRWTPAIISPDQQIAQDGTLALSRAQDIVQNDGYAFGAVAIHRDSVVGSQYKLNSKPNSLVLGAPEGWAEEFQEVVEARFNMVAESPENWFDARRMNTLTGLVRLAVGGFIMTGEVLASCEWMKPNGTRMQRRPFGTAIQMISPYRLSNPDNIMDDKYLRSGVKLDEMGAPIGYWLRKAFPGDPTDLEQWRWEYQPARFDWGRRRMIHIIEALLPGQTRGISEMVAALKQMKMTRNFQEVTLQNAIVNATYAAAIESELPSDVVFNQMGMGQTPFGDILKTYMGSLAEYIAGSKNIAIDGAKIPHLFPGTKLKMQPAGTPGGVGTDYEESLLRNIAASLGLSYEQFSRDYTKTNYSSARASMAETWKYMESRKKLVADRFASMIYTLWLEEEVNAGNVPLPPGFTWRDFYDPMKRDALCNAEWIGASRGQIDEKKETEAAILRIKNGLSTYEAEIARLGGDFREVFKQRAREEGIIKDLGLDFSGKMVEGTEASGSTGSTGSDNNNEEDTKE
Portal E 560 Chivirus Chi MTEKKRSTTQRAKKAAKTADVATLDATPQNPSALGGGLEGAERNTREMFRWTPAIISPDQQIAQDGTLALSRAQDIVQNDGYAFGAVAIHRDSVVGSQYKLNSKPNSLVLGAPEGWAEEFQEVVEARFNMVAESPENWFDARRMNTLTGLVRLAVGGFIMTGEVLASCEWMKPNGTRMQRRPFGTAIQMISPYRLSNPDNIMDDKYLRSGVKLDEMGAPIGYWLRKAFPGDPTDLEQWRWEYQPARFDWGRRRMIHIIEALLPGQTRGISEMVAALKQMKMTRNFQEVTLQNAIVNATYAAAIESELPSDVVFNQMGMGQTPFGDILKTYMGSLAEYIAGSKNIAIDGAKIPHLFPGTKLKMQPAGTPGGVGTDYEESLLRNIAASLGLSYEQFSRDYTKTNYSSARASMAETWKYMESRKKLVADRFASMIYTLWLEEEVNAGNVPLPPGFTWRDFYDPMKRDALCNAEWIGASRGQIDEKKETEAAILRIKNGLSTYEAEIARLGGDFREVFKQRAREEGIIKDLGLDFSGKMVEGTEASGSTGSTGSDNNNEEDTKE
Neck 2 F 121 Chivirus Chi MASNFAAIKAKARRDVHASLSVPARYENYSQDVIVEDLSVRWHNKIAIMGDLENGGYANIVEGIERIIFTREELAVKGVVLSEGDSIIMTAEGYENARLVLKTQEPIVGPVEVVWQVARAD
Tail Tube G 381 Chivirus Chi MNDNYQNNYVVGRGTVYFDRFQDGTNRKTGEMYFGNTPEFTINTDSETLDHYSSDHGMRVMDASVLLEASQGGTFTCDNINADNLALWFLGEVSNTTQTQQTDAKEVFNPIMRGRYYQLGTTDDNPTGVRGVTNFQMVKADASIAISVGSGDITSIVGATVVNPAGNYEIDLEAGRIYIEPDSTDLSGNVQIAVQYDVDAQKRTLVIGKSNMVYGALRMISDNPVGLNKNYYFPKVSIAPDGDYALKGDDWQVMSFTFKAMQLNNITQRVYIDIVEAAAAVDPTAQRTIEITPASTTATTGGAGVVCTVTVRDGTGTAVQGDAVTFTTVAGATVTPNSATTGATGTATTTVNRAAAGTATVTATLANGKAATTGTITFSAP
Tail Tube H 381 Chivirus Chi MNDNYQNNYVVGRGTVYFDRFQDGTNRKTGEMYFGNTPEFTINTDSETLDHYSSDHGMRVMDASVLLEASQGGTFTCDNINADNLALWFLGEVSNTTQTQQTDAKEVFNPIMRGRYYQLGTTDDNPTGVRGVTNFQMVKADASIAISVGSGDITSIVGATVVNPAGNYEIDLEAGRIYIEPDSTDLSGNVQIAVQYDVDAQKRTLVIGKSNMVYGALRMISDNPVGLNKNYYFPKVSIAPDGDYALKGDDWQVMSFTFKAMQLNNITQRVYIDIVEAAAAVDPTAQRTIEITPASTTATTGGAGVVCTVTVRDGTGTAVQGDAVTFTTVAGATVTPNSATTGATGTATTTVNRAAAGTATVTATLANGKAATTGTITFSAP
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-01-02
Deposition Author(s): Egelman, E.H. , Esteves, N.C. , Scharf, B.E. , Sonani, R.R.