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8VF4

Cryoem structure of ku homodimer super-complex with hairpin dna

PDB DOI: 10.2210/pdb8vf4/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Mycobacterium Tuberculosis H37Rv , Synthetic Construct

Deposited: 2023-12-21
Deposition Author(s): Baral, J. , Das, A.K. , Rouiller, I.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.1 Å

8vf4
Literature

Cryoem structure of ku homodimer super-complex with hairpin dna

Baral, J. , Das, A.K. , Rouiller, I.

Primary Citation of Related Structures: 8VF4


Proteins
Molecule Chains Sequence Length Organism Sequence
Non-homologous end joining protein Ku A 295 Mycobacterium Tuberculosis H37Rv , Synthetic Construct MGHHHHHHHHHHSSGHIEGRHMMRAIWTGSIAFGLVNVPVKVYSATADHDIRFHQVHAKDNGRIRYKRVCEACGEVVDYRDLARAYESGDGQMVAITDDDIASLPEERSREIEVLEFVPAADVDPMMFDRSYFLEPDSKSSKSYVLLAKTLAETDRMAIVHFTLRNKTRLAALRVKDFGKREVMMVHTLLWPDEIRDPDFPVLDQKVEIKPAELKMAGQVVDSMADDFNPDRYHDTYQEQLQELIDTKLEGGQAFTAEDQPRLLDEPEDVSDLLAKLEASVKARSKANSNVPTPP
Non-homologous end joining protein Ku B 295 Mycobacterium Tuberculosis H37Rv , Synthetic Construct MGHHHHHHHHHHSSGHIEGRHMMRAIWTGSIAFGLVNVPVKVYSATADHDIRFHQVHAKDNGRIRYKRVCEACGEVVDYRDLARAYESGDGQMVAITDDDIASLPEERSREIEVLEFVPAADVDPMMFDRSYFLEPDSKSSKSYVLLAKTLAETDRMAIVHFTLRNKTRLAALRVKDFGKREVMMVHTLLWPDEIRDPDFPVLDQKVEIKPAELKMAGQVVDSMADDFNPDRYHDTYQEQLQELIDTKLEGGQAFTAEDQPRLLDEPEDVSDLLAKLEASVKARSKANSNVPTPP
Non-homologous end joining protein Ku I 295 Mycobacterium Tuberculosis H37Rv , Synthetic Construct MGHHHHHHHHHHSSGHIEGRHMMRAIWTGSIAFGLVNVPVKVYSATADHDIRFHQVHAKDNGRIRYKRVCEACGEVVDYRDLARAYESGDGQMVAITDDDIASLPEERSREIEVLEFVPAADVDPMMFDRSYFLEPDSKSSKSYVLLAKTLAETDRMAIVHFTLRNKTRLAALRVKDFGKREVMMVHTLLWPDEIRDPDFPVLDQKVEIKPAELKMAGQVVDSMADDFNPDRYHDTYQEQLQELIDTKLEGGQAFTAEDQPRLLDEPEDVSDLLAKLEASVKARSKANSNVPTPP
Non-homologous end joining protein Ku J 295 Mycobacterium Tuberculosis H37Rv , Synthetic Construct MGHHHHHHHHHHSSGHIEGRHMMRAIWTGSIAFGLVNVPVKVYSATADHDIRFHQVHAKDNGRIRYKRVCEACGEVVDYRDLARAYESGDGQMVAITDDDIASLPEERSREIEVLEFVPAADVDPMMFDRSYFLEPDSKSSKSYVLLAKTLAETDRMAIVHFTLRNKTRLAALRVKDFGKREVMMVHTLLWPDEIRDPDFPVLDQKVEIKPAELKMAGQVVDSMADDFNPDRYHDTYQEQLQELIDTKLEGGQAFTAEDQPRLLDEPEDVSDLLAKLEASVKARSKANSNVPTPP
Non-homologous end joining protein Ku K 295 Mycobacterium Tuberculosis H37Rv , Synthetic Construct MGHHHHHHHHHHSSGHIEGRHMMRAIWTGSIAFGLVNVPVKVYSATADHDIRFHQVHAKDNGRIRYKRVCEACGEVVDYRDLARAYESGDGQMVAITDDDIASLPEERSREIEVLEFVPAADVDPMMFDRSYFLEPDSKSSKSYVLLAKTLAETDRMAIVHFTLRNKTRLAALRVKDFGKREVMMVHTLLWPDEIRDPDFPVLDQKVEIKPAELKMAGQVVDSMADDFNPDRYHDTYQEQLQELIDTKLEGGQAFTAEDQPRLLDEPEDVSDLLAKLEASVKARSKANSNVPTPP
Non-homologous end joining protein Ku L 295 Mycobacterium Tuberculosis H37Rv , Synthetic Construct MGHHHHHHHHHHSSGHIEGRHMMRAIWTGSIAFGLVNVPVKVYSATADHDIRFHQVHAKDNGRIRYKRVCEACGEVVDYRDLARAYESGDGQMVAITDDDIASLPEERSREIEVLEFVPAADVDPMMFDRSYFLEPDSKSSKSYVLLAKTLAETDRMAIVHFTLRNKTRLAALRVKDFGKREVMMVHTLLWPDEIRDPDFPVLDQKVEIKPAELKMAGQVVDSMADDFNPDRYHDTYQEQLQELIDTKLEGGQAFTAEDQPRLLDEPEDVSDLLAKLEASVKARSKANSNVPTPP

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (21-mer) c 21 NA GTTTTTAGTTTATTGGGCGCG
DNA (21-mer) e 21 NA GTTTTTAGTTTATTGGGCGCG
DNA (21-mer) g 21 NA GTTTTTAGTTTATTGGGCGCG
DNA (34-MER) d 34 NA CGCGCCCAGCTTTCCCAGCTAATAAACTAAAAAC
DNA (34-MER) f 34 NA CGCGCCCAGCTTTCCCAGCTAATAAACTAAAAAC
DNA (34-MER) h 34 NA CGCGCCCAGCTTTCCCAGCTAATAAACTAAAAAC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-12-21
Deposition Author(s): Baral, J. , Das, A.K. , Rouiller, I.