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8VF2

Cryoem structure of ku homodimer super-complex with linear dna

PDB DOI: 10.2210/pdb8vf2/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Mycobacterium Tuberculosis H37Rv , Synthetic Construct

Deposited: 2023-12-21
Deposition Author(s): Baral, J. , Das, A.K. , Rouiller, I.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.7 Å

8vf2
Literature

Cryoem structure of ku homodimer super-complex with linear dna

Baral, J. , Das, A.K. , Rouiller, I.

Primary Citation of Related Structures: 8VF2


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (40-MER) i 40 NA CCCCCCTGTCGCCGCCGACGTCTGTGATATGGCGTTGTTG
DNA (40-MER) g 40 NA CCCCCCTGTCGCCGCCGACGTCTGTGATATGGCGTTGTTG
DNA (40-MER) j 40 NA CAACAACGCCATATCACAGACGTCGGCGGCGACAGGGGGG
DNA (40-MER) h 40 NA CAACAACGCCATATCACAGACGTCGGCGGCGACAGGGGGG

Proteins
Molecule Chains Sequence Length Organism Sequence
Non-homologous end joining protein Ku A 295 Mycobacterium Tuberculosis H37Rv , Synthetic Construct MGHHHHHHHHHHSSGHIEGRHMMRAIWTGSIAFGLVNVPVKVYSATADHDIRFHQVHAKDNGRIRYKRVCEACGEVVDYRDLARAYESGDGQMVAITDDDIASLPEERSREIEVLEFVPAADVDPMMFDRSYFLEPDSKSSKSYVLLAKTLAETDRMAIVHFTLRNKTRLAALRVKDFGKREVMMVHTLLWPDEIRDPDFPVLDQKVEIKPAELKMAGQVVDSMADDFNPDRYHDTYQEQLQELIDTKLEGGQAFTAEDQPRLLDEPEDVSDLLAKLEASVKARSKANSNVPTPP
Non-homologous end joining protein Ku B 295 Mycobacterium Tuberculosis H37Rv , Synthetic Construct MGHHHHHHHHHHSSGHIEGRHMMRAIWTGSIAFGLVNVPVKVYSATADHDIRFHQVHAKDNGRIRYKRVCEACGEVVDYRDLARAYESGDGQMVAITDDDIASLPEERSREIEVLEFVPAADVDPMMFDRSYFLEPDSKSSKSYVLLAKTLAETDRMAIVHFTLRNKTRLAALRVKDFGKREVMMVHTLLWPDEIRDPDFPVLDQKVEIKPAELKMAGQVVDSMADDFNPDRYHDTYQEQLQELIDTKLEGGQAFTAEDQPRLLDEPEDVSDLLAKLEASVKARSKANSNVPTPP
Non-homologous end joining protein Ku C 295 Mycobacterium Tuberculosis H37Rv , Synthetic Construct MGHHHHHHHHHHSSGHIEGRHMMRAIWTGSIAFGLVNVPVKVYSATADHDIRFHQVHAKDNGRIRYKRVCEACGEVVDYRDLARAYESGDGQMVAITDDDIASLPEERSREIEVLEFVPAADVDPMMFDRSYFLEPDSKSSKSYVLLAKTLAETDRMAIVHFTLRNKTRLAALRVKDFGKREVMMVHTLLWPDEIRDPDFPVLDQKVEIKPAELKMAGQVVDSMADDFNPDRYHDTYQEQLQELIDTKLEGGQAFTAEDQPRLLDEPEDVSDLLAKLEASVKARSKANSNVPTPP
Non-homologous end joining protein Ku D 295 Mycobacterium Tuberculosis H37Rv , Synthetic Construct MGHHHHHHHHHHSSGHIEGRHMMRAIWTGSIAFGLVNVPVKVYSATADHDIRFHQVHAKDNGRIRYKRVCEACGEVVDYRDLARAYESGDGQMVAITDDDIASLPEERSREIEVLEFVPAADVDPMMFDRSYFLEPDSKSSKSYVLLAKTLAETDRMAIVHFTLRNKTRLAALRVKDFGKREVMMVHTLLWPDEIRDPDFPVLDQKVEIKPAELKMAGQVVDSMADDFNPDRYHDTYQEQLQELIDTKLEGGQAFTAEDQPRLLDEPEDVSDLLAKLEASVKARSKANSNVPTPP
Non-homologous end joining protein Ku E 295 Mycobacterium Tuberculosis H37Rv , Synthetic Construct MGHHHHHHHHHHSSGHIEGRHMMRAIWTGSIAFGLVNVPVKVYSATADHDIRFHQVHAKDNGRIRYKRVCEACGEVVDYRDLARAYESGDGQMVAITDDDIASLPEERSREIEVLEFVPAADVDPMMFDRSYFLEPDSKSSKSYVLLAKTLAETDRMAIVHFTLRNKTRLAALRVKDFGKREVMMVHTLLWPDEIRDPDFPVLDQKVEIKPAELKMAGQVVDSMADDFNPDRYHDTYQEQLQELIDTKLEGGQAFTAEDQPRLLDEPEDVSDLLAKLEASVKARSKANSNVPTPP
Non-homologous end joining protein Ku F 295 Mycobacterium Tuberculosis H37Rv , Synthetic Construct MGHHHHHHHHHHSSGHIEGRHMMRAIWTGSIAFGLVNVPVKVYSATADHDIRFHQVHAKDNGRIRYKRVCEACGEVVDYRDLARAYESGDGQMVAITDDDIASLPEERSREIEVLEFVPAADVDPMMFDRSYFLEPDSKSSKSYVLLAKTLAETDRMAIVHFTLRNKTRLAALRVKDFGKREVMMVHTLLWPDEIRDPDFPVLDQKVEIKPAELKMAGQVVDSMADDFNPDRYHDTYQEQLQELIDTKLEGGQAFTAEDQPRLLDEPEDVSDLLAKLEASVKARSKANSNVPTPP
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-12-21
Deposition Author(s): Baral, J. , Das, A.K. , Rouiller, I.