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FASTA Sequence PDB Format mmCIF Format
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8URB

Porcine epidemic diarrhea virus complete core polymerase complex

PDB DOI: 10.2210/pdb8urb/pdb

Classification: REPLICATION, TRANSFERASE/RNA
Organism(s): Porcine Epidemic Diarrhea Virus , Synthetic Construct

Deposited: 2023-10-25
Deposition Author(s): Anderson, T.K. , Kirchdoerfer, R.N.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.4 Å

8urb
Literature

Porcine epidemic diarrhea virus complete core polymerase complex

Anderson, T.K. , Kirchdoerfer, R.N.

Primary Citation of Related Structures: 8URB


Proteins
Molecule Chains Sequence Length Organism Sequence
nsp12 A 957 Porcine Epidemic Diarrhea Virus , Synthetic Construct STDMAYLNRVRGSSAARLEPCNGTDTQHVYRAFDIYNKDVACLGKFLKVNCVRLKNLDKHDAFYVVKRCTKSAMEHEQSIYSRLEKCGAVAEHDFFTWKDGRAIYGNVCRKDLTEYTMMDLCYALRNFDENNCDVLKSILIKVGACEESYFNNKVWFDPVENEDIHRVYALLGTIVSRAMLKCVKFCDAMVEQGIVGVVTLDNQDLNGDFYDFGDFTCSIKGMGIPICTSYYSYMMPVMGMTNCLASECFVKSDIFGEDFKSYDLLEYDFTEHKTALFNKYFKYWGLQYHPNCVDCSDEQCIVHCANFNTLFSTTIPITAFGPLCRKCWIDGVPLVTTAGYHFKQLGIVWNNDLNLHSSRLSINELLQFCSDPALLIASSPALVDQRTVCFSVAALGTGMTNQTVKPGHFNKEFYDFLLEQGFFSEGSELTLKHFFFAQKGDAAVKDFDYYRYNRPTVLDICQARVVYQIVQRYFDIYEGGCITAKEVVVTNLNKSAGYPLNKFGKAGLYYESLSYEEQDELYAYTKRNILPTMTQLNLKYAISGKERARTVGGVSLLSTMTTRQYHQKHLKSIVNTRGASVVIGTTKFYGGWDNMLKNLIDGVENPCLMGWDYPKCDRALPNMIRMISAMILGSKHTTCCSSTDRFFRLCNELAQVLTEVVYSNGGFYLKPGGTTSGDATTAYANSVFNIFQAVSANVNKLLSVDSNVCHNLEVKQLQRKLYECCYRSTTVDDQFVVEYYGYLRKHFSMMILSDDGVVCYNNDYASLGYVADLNAFKAVLYYQNNVFMSASKCWIEPDINKGPHEFCSQHTMQIVDKDGTYYLPYPDPSRILSAGVFVDDVVKTDAVVLLERYVSLAIDAYPLSKHENPEYKKVFYVLLDWVKHLYKTLNAGVLESFSVTLLEDSTAKFWDESFYANMYEKSAVLQENLYFQGSWSHPQFEKGGSGSSWSHPQFEK
nsp8 B 195 Porcine Epidemic Diarrhea Virus , Synthetic Construct SVASTYVGLPSYVIYENARQQYEDAVNNGSPPQLVKQLRHAMNVAKSEFDREASTQRKLDRMAEQAAAQMYKEARAVNRKSKVVSAMHSLLFGMLRRLDMSSVDTILNLAKDGVVPLSVIPAVSATKLNIVTSDIDSYNRIQREGCVHYAGTIWNIIDIKDNDGKVVHVKEVTAQNAESLSWPLVLGCERIVKLQ
nsp8 D 195 Porcine Epidemic Diarrhea Virus , Synthetic Construct SVASTYVGLPSYVIYENARQQYEDAVNNGSPPQLVKQLRHAMNVAKSEFDREASTQRKLDRMAEQAAAQMYKEARAVNRKSKVVSAMHSLLFGMLRRLDMSSVDTILNLAKDGVVPLSVIPAVSATKLNIVTSDIDSYNRIQREGCVHYAGTIWNIIDIKDNDGKVVHVKEVTAQNAESLSWPLVLGCERIVKLQ
nsp7 C 83 Porcine Epidemic Diarrhea Virus , Synthetic Construct SKLTDIKCSNVVLLGCLSSMNVSANSTEWAYCVDLHNKINLCNDPEKAQEMLLALLAFFLSKNSAFGLDDLLESYFNDNSMLQ

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (33-MER) i 33 NA CAUUCUCCUAAGAAGCUAUUAAAAUCACAGAUU
RNA (55-MER) j 55 NA CAGUGUCAUGGAAAAACAGAAAAAUCUGUGAUUUUAAUAGCUUCUUAGGAGAAUG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-10-25
Deposition Author(s): Anderson, T.K. , Kirchdoerfer, R.N.