Gaussian mixture models based single particle refinement - gpcr (substance p bound to active human neurokinin 1 receptor in complex with minigs399 from empiar-10786)
PDB DOI: 10.2210/pdb8u26/pdb
Classification: MEMBRANE PROTEIN Organism(s): Homo Sapiens , Lama Glama
Deposited: 2023-09-05 Deposition Author(s): Chen, M. , Pintilie, G.
Gaussian mixture models based single particle refinement - gpcr (substance p bound to active human neurokinin 1 receptor in complex with minigs399 from empiar-10786)
Primary Citation of Related Structures: 8U26
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | A | 248 | Homo Sapiens , Lama Glama | NSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGADNSGKSTIVKQMRILHGGSGGSGGTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVDSSDYNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENARRIFNDCRDIIQRMHLRQYELL |
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 | B | 370 | Homo Sapiens , Lama Glama | MHHHHHHLEVLFQGPEDQVDPRLIDGKGSSGSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN |
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 | G | 68 | Homo Sapiens , Lama Glama | MASNNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFREKKFFC |
Nanobody 35 | N | 142 | Homo Sapiens , Lama Glama | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSGSEDQVDPRLIDGK |
Substance-P receptor | R | 418 | Homo Sapiens , Lama Glama | DYKDDDDASIDMDNVLPVDSDLSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRLSATATKVVICVIWVLALLLAFPQGYYSTTETMPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMKSTRYLQTQGSVYKVSRLETTISTVVGAHEEEPEDGPKATPSSLDLTSNCSSRSDSKTMTESFSFSSNVLS |
Protachykinin-1 | S | 11 | Homo Sapiens , Lama Glama | RPKPQQFFGLM |
Method: ELECTRON MICROSCOPY
Deposited Date: 2023-09-05 Deposition Author(s): Chen, M. , Pintilie, G.