Crystal structure of fab.b1.23.2 in complex with mhc-i (hla-b*44:05)
PDB DOI: 10.2210/pdb8tq6/pdb
Classification: IMMUNE SYSTEM Organism(s): Homo Sapiens , Mus Musculus , Synthetic Construct
Deposited: 2023-08-06 Deposition Author(s): Boyd, L.F. , Jiang, J. , Margulies, D.H. , Natarajan, K.
Crystal structure of fab.b1.23.2 in complex with mhc-i (hla-b*44:05)
Boyd, L.F. , Jiang, J. , Margulies, D.H. , Natarajan, K.
Primary Citation of Related Structures: 8TQ6
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
HLA class I histocompatibility antigen B alpha chain (HLA-B*44:05) | A | 274 | Homo Sapiens , Mus Musculus , Synthetic Construct | GSHSMRYFYTAMSRPGRGEPRFITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRTALRYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQYAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQDRAYLEGLCVESLRRYLENGKETLQRADPPKTHVTHHPISDHEVTLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW |
HLA class I histocompatibility antigen B alpha chain (HLA-B*44:05) | C | 274 | Homo Sapiens , Mus Musculus , Synthetic Construct | GSHSMRYFYTAMSRPGRGEPRFITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYWDRETQISKTNTQTYRENLRTALRYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQYAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQDRAYLEGLCVESLRRYLENGKETLQRADPPKTHVTHHPISDHEVTLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW |
Beta-2-microglobulin | B | 100 | Homo Sapiens , Mus Musculus , Synthetic Construct | MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
Beta-2-microglobulin | D | 100 | Homo Sapiens , Mus Musculus , Synthetic Construct | MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
MHC class II antigen peptide | E | 9 | Homo Sapiens , Mus Musculus , Synthetic Construct | EEFGRAFSF |
MHC class II antigen peptide | P | 9 | Homo Sapiens , Mus Musculus , Synthetic Construct | EEFGRAFSF |
Fab B1.23.2 Heavy Chain | F | 213 | Homo Sapiens , Mus Musculus , Synthetic Construct | VQLEQSGTVLARPGSSVKMSCKASGYSFTSYWMHWVKQRPGQGLEWIGAIYPGNSDATYNQKFKGKAKLTAVTSANTAYMELSSLTNEDSAVYYCTNYFDQWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPAA |
Fab B1.23.2 Heavy Chain | H | 213 | Homo Sapiens , Mus Musculus , Synthetic Construct | VQLEQSGTVLARPGSSVKMSCKASGYSFTSYWMHWVKQRPGQGLEWIGAIYPGNSDATYNQKFKGKAKLTAVTSANTAYMELSSLTNEDSAVYYCTNYFDQWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPAA |
Fab B1.23.2 Light Chain | G | 212 | Homo Sapiens , Mus Musculus , Synthetic Construct | TTVTQTPSSMYASLGERVTITCKASQDINSYLNWFQLKPGKSPKTLIYRANRLVDGVPSRFSGSGSGQDYSLTISSLEYEDMGIYYCLQYDELYTFGGGTKLEMKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC |
Fab B1.23.2 Light Chain | L | 212 | Homo Sapiens , Mus Musculus , Synthetic Construct | TTVTQTPSSMYASLGERVTITCKASQDINSYLNWFQLKPGKSPKTLIYRANRLVDGVPSRFSGSGSGQDYSLTISSLEYEDMGIYYCLQYDELYTFGGGTKLEMKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC |
Method: X-RAY DIFFRACTION
Deposited Date: 2023-08-06 Deposition Author(s): Boyd, L.F. , Jiang, J. , Margulies, D.H. , Natarajan, K.