8TH8
Linker domain of nexin-dynein regulatory complex from tetrahymena thermophila
PDB DOI: 10.2210/pdb8th8/pdb
Classification: STRUCTURAL PROTEIN Organism(s): Tetrahymena Thermophila
Deposited: 2023-07-14 Deposition Author(s): Bui, K.H. , Ghanaeian, A.G.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 7.4 Å
Linker domain of nexin-dynein regulatory complex from tetrahymena thermophila
Primary Citation of Related Structures: 8TH8
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Dynein regulatory complex protein 1/2 N-terminal domain-containing protein | A | 826 | Tetrahymena Thermophila | MNPSQTQKGKIQIQVSRGSIDLLVRTMYEDINNIKLKNERFQKKKRAEDERRRRERYAEIQQEAIASGKKNAALEMKWAELKELDECEELNREMQDQQQTFQQIIEGKENLRKEFEEELKRKDDEYVKMLKEQSNDIKDMISKMRSQFYKIRDANMQELEDIERHFEQERSNLLNEFKAKIQATFKKHLDLEEQYVKEHAKTEEEQTKNIEDLRIKGAKHYAELKITMETEIQDLEKCFEDMKALYQLITEKLDYSLKVLQEKFHENNSMCDELKRKENNFKNRLKQLTKDYKQYDKKFKLENKNLTQEYKRIIRQFKELQKKFKHFEKADLDKYSEIQKMNEAEVKELKDKIIKCNITIHIQQLGMQWIPPQSEEEILAQQKLQLEQGGKAEEEEEREFEFCISEIKIGEICNIILEEADFLIDDKLREELEGSAEPEQIFQRLDCIKKCLYIDSEDEMNLFFRELITKCRVKSAEEIEEEARKQLLLLGLIKEAEENENPEGEEVQQQEGAQQKKKEEGNKKDDPKGKEGAKDSKENANPQGQNKSNQDERKKKKDGQDDHAGQGQGQYDSNQGGMGENQEEGENAEGQENLEGEIEKEIDLENTQINLNEVVKFLQNWQANKDKRKEKLEKESSKKAVKQETEREKKERIAREGKKYWEKLTQVLPERTFRIWNVNFFKFSFEKQILLNQINKLRFWTDLCPNIMNFFWTDKNQSKKPVNCITKMKNQRIFQINTYKLIMNLLSALQDSLIQIKDKDDFIQTKISTNLFTFHNFQILLQIFIVNQSFLFIRLCQSYSKKIILLIKNINQKLFNLSNFKNQFSF |
| Dynein regulatory complex protein 9 | J | 372 | Tetrahymena Thermophila | MNQIDAHKLTIILRDATERLTFLDTINRQDDLSSELAGYEISKLLKKQKNLENQYADLVQLRTSLTGIQNKKNLIETQTKIVDVAQNLKESTKKLCRLFKENPDLESDALKVKKDRIQFMAVIEQLIQMVQNNSLTKFQSMTTLELEDQDRLRKLIFREKELYQEIKKLQFDRNQENKEYDNEQKDTNLKIQNLKERLLYKKARAQLKNQYKEKEARAEEGTQQRMYEFEQKQLKEKINNLKQKTDTENMVHEQLRNFLIEKEDQIKQKSDEWAKKVETCREQLQEEIDRLTVEKEKKQEELRELRERDQKEQEEKDRRERQELEEADRKQQEELDQIRLDNAIKLIQIEYQEWKDAGGGKKKRKKGKKKKK |
| Dynein regulatory complex protein 10 | K | 434 | Tetrahymena Thermophila | MQNLSKMQSRLHPRPEGEGGGGGGRTKEKGKSLQETHKEMLKNIESTNIGKPTIVEAQRILKIIDNLSTNLTIFIYLDSELISKFLDVAKHSKLSKDLVSKLSQRCLDLLKSQAEIEAKFKPYASLLDQSNKEAEDVEEEKMIDAERLRMQLENNFKDLVRHLRNSPEDFEIIKSMKTNVNPDLNDLVHCIHCQKVIMLKKLSTASEEDENHKAQLRDLEEKIEELEKKKNKIQEDLTKLKEHRQKFSKEKKEELEKLKNEIAEVKAEKEKKASQLKNELDNRLKQLERDHLAKKDKLDKELQKLEDDFAKLKQDHANDETKLKTNKRQQQNSLADNIESYDALMKDQHQKKQEIEEELAKIIEEVDTLKQLFKEIDEEKQRERELEEEFRLKKEQWEIQERRKKEAARCILHFLMARKEKSKKKKKKKGKKKK |
| AAA family ATPase CDC48 subfamily protein | L | 862 | Tetrahymena Thermophila | MSNMMYNMKWQEAINDLMEQVTLEYLPLEQNEQQLGMKYKRDSSEWFHFWATLYIKYIDIYKKLEDCYDQLVHPQKRVLLKEMLENVIVRLCETKSQVVKYNTQYDATYKSDYPNLDELVMDLKLTPDCLDIPIPRYFREEDKKRLDERNQILDALLLEYTDTKEPQEEQYEDQNTLQADMDTAIRIIQRYERGRQGIERANLAKILKKEEEKKLERQKKLAEGTEIGEETEKDDAALVIKKYWRGYKSRKLVQDIREEELLFLGMKKVVEDPTLPESQYKQAQNKRQKMKYIQEEHEQEFNDEIENLKRLVKGNEGPDILDKMRAERREWIMRELEKNEFKEAPQDPSEFYNQQVMDPEQQAAEAAKAAEEAKKKGAAKKDDKKKKGKPSELDEFLENNKPTGPSPIVLKLQEQIEKHSGEWSKRDETNNFEQKHETELAKMLIKPVVEEQIKQQVDEMIAEELDIVRLRYDIKKKKQKKPPRPRNKGKNKKKFPGDSSNKGRDPKDILAGLVEKRVAKKLIPASLMDLKGEQNVLGKIQEIQADENLKKTEALTDAKLKKAQLEEPSTKMPDPSIAQIRQIIAEYIAFPLGSKYAKEKLDKMNYFFFMGPRGSGKTLAVRALAHECNAIVLDISPSNIDGQYTDKKQIDGMINSAFKVAKEFQPAIIYCEDFEYIFGQAKKKKSQVNPLFAKMKKPLMDFKKGKFFEPEDRVVFIGSTNRPWDCSQKEIKSFFDKKIYFPFPNYGTRMLLFKTFLEQKKVPLPDNFPINTIAHITEGWSAGSFKMAIDRVFTERRLQKINEEQIKLSEFIGPLSNVPFTSKEEFKEFKKFNQVVTGLQANYEAKKAPADDQKGDKNKKKK |
| DUF4201 domain-containing protein | P | 794 | Tetrahymena Thermophila | MASEDGEMPSQFEGIDPEQLTESQMQQYMMEMQRQGLLDSNMEGGQYEEGYEEGQEGEGYGEEYGDQDYDGNQNEYDSQQDSQQQGHDQVNEMHQDRYDRRVNSEISGNYEADDETLRKIRRDLLDNINLERRHRDLQPVYIDLTTNNISQYYSEYLVNNEHNQDFYENAKVRYNNLGECELCHITAKFEPDADITKEYIYDYFMEIGYLFLESEEEKRIILNPANNHIGIGVFFDEIQIVVVLILSEKVLCIQKISQPEQNKIEIRGKMLDENFGIYAIRIMNVDDQKKDIKGVGPEFIEYTRSTQEWMASFELELYNQDRMAIEYYTRVSPDSIPYKKKQSKNEKLTYKHLQLRLRTPFQIYPDPKYAAEDEKERIRKEQEILAHEEQERKEREENDAKRLKQSRKDYGDGQYDDDEHGQDDFNSQSDISDKDKHHDSMHAEQEQNQQAAQQQQDTISNKEIRQELEMAITEAQRQHDEFMLQNHKLQEEIKLLKNKNDGFVDRSNETAMNEHKYLNTLAHVHQIRLDLKQTQTRYNQMSQELQKKLEQKQKKCNEIKYAFLELKREVAKKAANSRTDKPIPEQQINEWEKAELQKSKELQELRLQILRLRNAYVKNQKILKKKEELAEGLHLIDFEQLKIENQTLNEKIEERNEELHKLKKKNTTTIQILTHTREKLGFVQGENGELNSQNVRKDQELDDMRKQLTQQKKTKDKLRSVNLTLKQQTGIVNSEELGQDYRDLRTRVSKLEEEKKRLEQKLRSMHEAIKTANQISTQNMQSQNNSLKKPYQPY |
| Calmodulin 7-2 | Q | 202 | Tetrahymena Thermophila | MDNTGKLEKQLVTLNDGLPKKPAKEIIEELKHHLYQDFQKFFSEEKKQQYQNNFALFDRDNDKYINLSELKELLTSVNITFPDDELEELYNEFCLTSPEADGINEDAVFIIVSKKIRDNDKDEQLTQAFKLVEKAVNDELAKTPNETKEQEGYIRVEQFKELLMTLGNRWSEEQANEFLKDINPKSDERINYLDVVKKLMKR |
| Calmodulin 7-2 | R | 202 | Tetrahymena Thermophila | MDNTGKLEKQLVTLNDGLPKKPAKEIIEELKHHLYQDFQKFFSEEKKQQYQNNFALFDRDNDKYINLSELKELLTSVNITFPDDELEELYNEFCLTSPEADGINEDAVFIIVSKKIRDNDKDEQLTQAFKLVEKAVNDELAKTPNETKEQEGYIRVEQFKELLMTLGNRWSEEQANEFLKDINPKSDERINYLDVVKKLMKR |
| Coiled-coil domain-containing protein 153 | S | 187 | Tetrahymena Thermophila | MSKKSGKGKGKNDGDELGAEKEQVLRTKVESLIQRLGHEQERADRAKAAENELRARLFDLDKDFKNEKDRLFSITSDMTRQYKQMQDELLNQVNDLNKTVIEKDEEIKKKDQQIQDMTKDYEYKLKKKDDEIQDLKRKIEEMSAEFAKMLKDTLDKMQERIEMVQWDSDTDPQMMKRLKDMTGLSNN |
| Coiled-coil protein, putative | B | 506 | Tetrahymena Thermophila | MALLGKTLKGRSTRPGGIPQKRNIKWRQLAKNQEEFDQLKQLAKMKREGLKARIKDEQKVVTFNKKKLITYWRKIMRIAKTEQLKNEIDIYSQNNQRELDSKEAFIQMLDKNLDEAEDQFQIALRNHLIHIENLMQLQEARMRGLAEEFNRDVNILETEFDLEREEMVKTHKTQLKELEDMIETVKEEDKKKTEEAQNEFSQFKEETKNKNLEETNVMKIILETKQTKYYTELEQMNSKFQSDTSNKVKDHQFYHAHNKNRKQEIDRYLRTISSKKAKIDLMKLKILQHCKEFNARNSALKKEKENISRNYHELKLKMQKFREEESRRLKELSNNSRNAVLKLREYCALGEKILKTAELCRRLETEKEKVLPFYESSVDEDQIPEQLKNEFEHLKKEDAEEYAYLNNFYKRYNKVLLDKLAIEKQKENLQRDNQLLKSLLKQYLDGISLNDDVLKNENNPLLVVNHKFNLGKMPVEKIENKTVIEGVFEVRNTSHQLQGQRAPPFQ |
| LRRC48 protein | C | 575 | Tetrahymena Thermophila | MSNYISNYVQSTIVTKTVQNKDKKTGKNSVDPRVINEQLILDAVKQFNQENNKITTENIILQQLRQLQLSFKNILKIQHLQGLERLEKLQLDNNIIEKIENIDHLVNLKWLDLSFNCIKKIEGLDKLKELTDLSLFNNYIEKIEGLHNNTKLNVFSIGNNRLKSYEEITLYFGYKPRGEEGTNDRPEFKRLQVLNVSGNPFTKDKENEYKNHIICAIPNLKYLDYVFIDEGDRQLIRQDEQISNSYNFTTTDYYQQMQAQEQKEEMDRQTLKKKKDARMDILDNLKDEYLKIEDLQRVKIIKPNQINEEIEKYCGKINDHVVEMQAAVIQKHQLILQEMSKTEVSYKEQEALHEKETLQILKEFEHEKKVEFRNWEKEAANGDAKKEESRLKTLLQKTTSLKNKLMDIEIQLVEELEAIFTDYDTKKKETAWKDIEEIIVLGQKKIEEENVKFYSNLNVIKNKEEANYNSTQQQQLEEENNEEDDEKASLLENKEQLAQMIGNIKETLIDSHTKIILSAQMELQKDLAEYAKQQKNKMYERNRKNISQIIAQIDAYQTEINEKLKQGDDESDHEN |
| Growth-arrest-specific microtubule-binding protein | D | 472 | Tetrahymena Thermophila | MSKAAKAKKNVPVVSKLEADARKAAEGVNDNESEEFKKAMRKEARALVEQFNEEKKLLAFYQQERQKINYNWIIAKKELEDKKSELINKEREIQDLQENHFMTLNVYKQKIKHLLFQNQDQQSELKKDVEVTLKQLEDQHRIKSRELKTDVRSLKVTKKEQEISQQDYLFALKSEHDKQMTLMRQDYERQVNDIKRKYDLKMQNLTKEMEEARAAMIKQLEDNKNQKIAEIIKEHTQKYNDIKNYYSEITATNLDYRKTLKNEIKELQTKDEEYKKTLQQTEKGYKELNEPLQALGIEIIQLKKQDEEQEAIIKEKEELKQKIDNQERLFRKLEYEYEVKLQQFQYLERERNALYAKFNQTVFEIHQKSGLENLILEKKVTNLREDLEIKDLQIHQVLTAANIDPNSVGSINKSLEEVESLKNELISELQAQLKQIRKAHSHMVKAYEGKLSEFVIPVEELGFDPLVPTNTD |
| Growth-arrest-specific microtubule-binding protein | E | 468 | Tetrahymena Thermophila | MPPKKAKGKKKKEEEPDDEYKSMTGADLTQTLEKLKERVNEMRTNRNYIQMDRDMVENFYHNTLKEISEVKTKISNKETEAEEKESKHRIDVKVFLQKVKHLEYEQEKSNLNIEDDGKKAKEKEDAYFEDITKNMKQLKTQLKSEYLEKEKANIQQVQEEKKDHQSLLKIQQKKFDELINNLIIKYEERLAKLKEDLELKLKVEIHELEERKNLHINELMNNHEKAFAELKKYYNDITAENLNLIKAHKEKIAQIYANIQLNTKNVADNQAKNEQLKEPLAKHREIRNKLKEDLKQFAKHKMSLQNLKSKAITLKDKITKLERDGKDLDEKYEKVVREKQELEKKFEDITQEVKKNADLNNNVLSNRLQILLKEYNNKEEELRTIIDNAGLDHNLHEQLKQRVQQSIEAKNTLIKNLKYSIHHATKAYNDAIRVYEAKLVEFGIPIEELGFQPLETITSSMPAGLVSS |
| Flagellar associated protein | F | 461 | Tetrahymena Thermophila | MLAKKLALARSQGKPDPFKKDEFPLLQHIAVEVVSQNYILYPDLKGVPENVRDTIISKITTDLDILTMAPNIDQESFWQRACKNRWEKSQKSINIEEHGRSWKVAYLERYMEEFLTNIQNADDPNKKQILQAELKAAASWIHTLNLQNINQNIDIDFICKYLPLLTSLTLTYGTKYSGMDYNKQSVGMKLSEAANLGEAIKNCYSLLSLNISANMIDDDLLRFIMAGVNMNISLIELNLSHNKIEDQGARRIAKFLMRNEILLYLNLGNNLIGYEGSRYLAQALKVNKNLQSLNLKLNNLGDKAGKKLFQDLMLNKTLLELDVSGNQFEFETALKLSDYVADSMCGLKVLNIANNDFNDSCYENLKTGFTKNYSLAKLDLRGNKFSKTQEEKEQELKDPFRMFNLSQTEKELTQIIIRHDLTAQKIQFFSESDLDKIKQLKELQGAKQEPEKVIQQDQNKE |
| Kinase domain protein | G | 345 | Tetrahymena Thermophila | MGDKKGKKKGGGEEDESTLQLSRQYKKKCELNGINPSKLFKEKLDFAVEEDENIEKIHLWEELGPVGVRSIMDSLTEIPYLHTKSIRLWKVKAQDEGTRTICNYMEKSKTIEYLDLMDNQVGSLGCEFLGRVLHPQIEIPLLKLKLDHNEFGTEGLMQLAAGLCMNSVLEKLSLNYCAITAEGSKYIQQILSFVNTNLKKLKMKGNLLKNEGVHQLFRAFKVNKTLEKVDLSDNQFDTTLGDDQDPEANPNFFETNKDAIEHNKQIIENICEVLKAADTLLYYDFRFNNISKTDAKAIIDCLEANKNIYYMELSEHIPKDLIERKKGLMKKRKPKKKKKKKAKKK |
| Coiled-coil lobo-like protein, putative | H | 852 | Tetrahymena Thermophila | MDHNEGGYSHHQIEGQEGQQQQAPVGGGGEDIFQVLENITQVQNEKLKRCQEFKEQENIPRQYIENSPKEELVLEHVIQFKRQFQYQLYYEDKRDLFLYPKNECDVYKFICTTIRPTKLGFLELYDYQQCSKYLSEFVQYEELDPPNEFPLVIPSPTNVAVWQKGDCFDMSILLCSLLIGVGYDAYCVYGKAPREITTRNESLMECLFLEKGKYIEENDKKPKQTLEQNENALLKKPIAHSKWDQTQETKAREAEEEKRRIALTINDDEPDELLEDPYQGQRVHCWVLLRSGKRDVQQNIFIEPSTGRMYSPSTCPYECVDAVFNNLNFWINMKPECEVKNLNFEEMDSSLNWEYVMLDTLLFNKGNGNDEEGNENIDDPLNKQAQRDPEQEQLQDIAQLLDMPPPWPPKIYIDKEKFLMGTPLGEGTVYYNKVKVDNYAPYSQPDGLVQKITIFQDYKRLKVKEYRYFYKHRSDKLSIRRRYPFEFKTIEEYEPQKYENKTIPQALQQWRQVIQIDRHLRIIKYYHNRNHDGLIERVEQIGEKTMMFYQNRDDRVIYRSIRFDNKRAPSSQNNDKVFQDNHVGDVQITKMTQKFEKNPHYPANEQIQKMVIDLIKDKVIVYYHMNDGEITPIVKIYPRDSMHGFAKLNEPGGDNKIDDPLVQLENTKMVNLEKDCLNQLKQQEKIARDDEKTIREGEIRLEKTLYDKARDRFKESSKKNDDDLAKDAAASDYLYPYLEKRKLLGVSEINAQVAMEIKNEVMQKLKERLLSRAEIIQRRLEEQRQVLEQKEAQVAKRQEIDPKQEEEIRDINFKIDILEQRALRFESMALQKYEEMDNRLNKDARLAALHRK |
| EF-hand calcium-binding domain protein | I | 185 | Tetrahymena Thermophila | MYDPNTSQTEKQKQEEFLKLKIQEAFNLFVKDKKGIVDKREIPYIMRYLGQFPSEAQVRDAILPEIEEDEPSEFIKYSKFEPYMLKVLKEREYEPDDPEALLAAFKLLDQEGKGYIEIDMMKTFLEKQGIEFREQETKSFIEFATNKDPNATVIYYEDYISRLQAFTDKHIESVMKGYNNFQVKK |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2023-07-14 Deposition Author(s): Bui, K.H. , Ghanaeian, A.G.