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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8TH8

Linker domain of nexin-dynein regulatory complex from tetrahymena thermophila

PDB DOI: 10.2210/pdb8th8/pdb

Classification: STRUCTURAL PROTEIN
Organism(s): Escherichia Coli Mp020980.2

Deposited: 2023-07-14
Deposition Author(s): Bui, K.H. , Ghanaeian, A.G.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 7.4 Å

8th8
Literature

Linker domain of nexin-dynein regulatory complex from tetrahymena thermophila

Bui, K.H. , Ghanaeian, A.G.

Primary Citation of Related Structures: 8TH8


Proteins
Molecule Chains Sequence Length Organism Sequence
Dynein regulatory complex protein 1/2 N-terminal domain-containing protein A 826 Escherichia Coli Mp020980.2 MNPSQTQKGKIQIQVSRGSIDLLVRTMYEDINNIKLKNERFQKKKRAEDERRRRERYAEIQQEAIASGKKNAALEMKWAELKELDECEELNREMQDQQQTFQQIIEGKENLRKEFEEELKRKDDEYVKMLKEQSNDIKDMISKMRSQFYKIRDANMQELEDIERHFEQERSNLLNEFKAKIQATFKKHLDLEEQYVKEHAKTEEEQTKNIEDLRIKGAKHYAELKITMETEIQDLEKCFEDMKALYQLITEKLDYSLKVLQEKFHENNSMCDELKRKENNFKNRLKQLTKDYKQYDKKFKLENKNLTQEYKRIIRQFKELQKKFKHFEKADLDKYSEIQKMNEAEVKELKDKIIKCNITIHIQQLGMQWIPPQSEEEILAQQKLQLEQGGKAEEEEEREFEFCISEIKIGEICNIILEEADFLIDDKLREELEGSAEPEQIFQRLDCIKKCLYIDSEDEMNLFFRELITKCRVKSAEEIEEEARKQLLLLGLIKEAEENENPEGEEVQQQEGAQQKKKEEGNKKDDPKGKEGAKDSKENANPQGQNKSNQDERKKKKDGQDDHAGQGQGQYDSNQGGMGENQEEGENAEGQENLEGEIEKEIDLENTQINLNEVVKFLQNWQANKDKRKEKLEKESSKKAVKQETEREKKERIAREGKKYWEKLTQVLPERTFRIWNVNFFKFSFEKQILLNQINKLRFWTDLCPNIMNFFWTDKNQSKKPVNCITKMKNQRIFQINTYKLIMNLLSALQDSLIQIKDKDDFIQTKISTNLFTFHNFQILLQIFIVNQSFLFIRLCQSYSKKIILLIKNINQKLFNLSNFKNQFSF
Dynein regulatory complex protein 9 J 372 Escherichia Coli Mp020980.2 MNQIDAHKLTIILRDATERLTFLDTINRQDDLSSELAGYEISKLLKKQKNLENQYADLVQLRTSLTGIQNKKNLIETQTKIVDVAQNLKESTKKLCRLFKENPDLESDALKVKKDRIQFMAVIEQLIQMVQNNSLTKFQSMTTLELEDQDRLRKLIFREKELYQEIKKLQFDRNQENKEYDNEQKDTNLKIQNLKERLLYKKARAQLKNQYKEKEARAEEGTQQRMYEFEQKQLKEKINNLKQKTDTENMVHEQLRNFLIEKEDQIKQKSDEWAKKVETCREQLQEEIDRLTVEKEKKQEELRELRERDQKEQEEKDRRERQELEEADRKQQEELDQIRLDNAIKLIQIEYQEWKDAGGGKKKRKKGKKKKK
Dynein regulatory complex protein 10 K 434 Escherichia Coli Mp020980.2 MQNLSKMQSRLHPRPEGEGGGGGGRTKEKGKSLQETHKEMLKNIESTNIGKPTIVEAQRILKIIDNLSTNLTIFIYLDSELISKFLDVAKHSKLSKDLVSKLSQRCLDLLKSQAEIEAKFKPYASLLDQSNKEAEDVEEEKMIDAERLRMQLENNFKDLVRHLRNSPEDFEIIKSMKTNVNPDLNDLVHCIHCQKVIMLKKLSTASEEDENHKAQLRDLEEKIEELEKKKNKIQEDLTKLKEHRQKFSKEKKEELEKLKNEIAEVKAEKEKKASQLKNELDNRLKQLERDHLAKKDKLDKELQKLEDDFAKLKQDHANDETKLKTNKRQQQNSLADNIESYDALMKDQHQKKQEIEEELAKIIEEVDTLKQLFKEIDEEKQRERELEEEFRLKKEQWEIQERRKKEAARCILHFLMARKEKSKKKKKKKGKKKK
AAA family ATPase CDC48 subfamily protein L 862 Escherichia Coli Mp020980.2 MSNMMYNMKWQEAINDLMEQVTLEYLPLEQNEQQLGMKYKRDSSEWFHFWATLYIKYIDIYKKLEDCYDQLVHPQKRVLLKEMLENVIVRLCETKSQVVKYNTQYDATYKSDYPNLDELVMDLKLTPDCLDIPIPRYFREEDKKRLDERNQILDALLLEYTDTKEPQEEQYEDQNTLQADMDTAIRIIQRYERGRQGIERANLAKILKKEEEKKLERQKKLAEGTEIGEETEKDDAALVIKKYWRGYKSRKLVQDIREEELLFLGMKKVVEDPTLPESQYKQAQNKRQKMKYIQEEHEQEFNDEIENLKRLVKGNEGPDILDKMRAERREWIMRELEKNEFKEAPQDPSEFYNQQVMDPEQQAAEAAKAAEEAKKKGAAKKDDKKKKGKPSELDEFLENNKPTGPSPIVLKLQEQIEKHSGEWSKRDETNNFEQKHETELAKMLIKPVVEEQIKQQVDEMIAEELDIVRLRYDIKKKKQKKPPRPRNKGKNKKKFPGDSSNKGRDPKDILAGLVEKRVAKKLIPASLMDLKGEQNVLGKIQEIQADENLKKTEALTDAKLKKAQLEEPSTKMPDPSIAQIRQIIAEYIAFPLGSKYAKEKLDKMNYFFFMGPRGSGKTLAVRALAHECNAIVLDISPSNIDGQYTDKKQIDGMINSAFKVAKEFQPAIIYCEDFEYIFGQAKKKKSQVNPLFAKMKKPLMDFKKGKFFEPEDRVVFIGSTNRPWDCSQKEIKSFFDKKIYFPFPNYGTRMLLFKTFLEQKKVPLPDNFPINTIAHITEGWSAGSFKMAIDRVFTERRLQKINEEQIKLSEFIGPLSNVPFTSKEEFKEFKKFNQVVTGLQANYEAKKAPADDQKGDKNKKKK
DUF4201 domain-containing protein P 794 Escherichia Coli Mp020980.2 MASEDGEMPSQFEGIDPEQLTESQMQQYMMEMQRQGLLDSNMEGGQYEEGYEEGQEGEGYGEEYGDQDYDGNQNEYDSQQDSQQQGHDQVNEMHQDRYDRRVNSEISGNYEADDETLRKIRRDLLDNINLERRHRDLQPVYIDLTTNNISQYYSEYLVNNEHNQDFYENAKVRYNNLGECELCHITAKFEPDADITKEYIYDYFMEIGYLFLESEEEKRIILNPANNHIGIGVFFDEIQIVVVLILSEKVLCIQKISQPEQNKIEIRGKMLDENFGIYAIRIMNVDDQKKDIKGVGPEFIEYTRSTQEWMASFELELYNQDRMAIEYYTRVSPDSIPYKKKQSKNEKLTYKHLQLRLRTPFQIYPDPKYAAEDEKERIRKEQEILAHEEQERKEREENDAKRLKQSRKDYGDGQYDDDEHGQDDFNSQSDISDKDKHHDSMHAEQEQNQQAAQQQQDTISNKEIRQELEMAITEAQRQHDEFMLQNHKLQEEIKLLKNKNDGFVDRSNETAMNEHKYLNTLAHVHQIRLDLKQTQTRYNQMSQELQKKLEQKQKKCNEIKYAFLELKREVAKKAANSRTDKPIPEQQINEWEKAELQKSKELQELRLQILRLRNAYVKNQKILKKKEELAEGLHLIDFEQLKIENQTLNEKIEERNEELHKLKKKNTTTIQILTHTREKLGFVQGENGELNSQNVRKDQELDDMRKQLTQQKKTKDKLRSVNLTLKQQTGIVNSEELGQDYRDLRTRVSKLEEEKKRLEQKLRSMHEAIKTANQISTQNMQSQNNSLKKPYQPY
Calmodulin 7-2 Q 202 Escherichia Coli Mp020980.2 MDNTGKLEKQLVTLNDGLPKKPAKEIIEELKHHLYQDFQKFFSEEKKQQYQNNFALFDRDNDKYINLSELKELLTSVNITFPDDELEELYNEFCLTSPEADGINEDAVFIIVSKKIRDNDKDEQLTQAFKLVEKAVNDELAKTPNETKEQEGYIRVEQFKELLMTLGNRWSEEQANEFLKDINPKSDERINYLDVVKKLMKR
Calmodulin 7-2 R 202 Escherichia Coli Mp020980.2 MDNTGKLEKQLVTLNDGLPKKPAKEIIEELKHHLYQDFQKFFSEEKKQQYQNNFALFDRDNDKYINLSELKELLTSVNITFPDDELEELYNEFCLTSPEADGINEDAVFIIVSKKIRDNDKDEQLTQAFKLVEKAVNDELAKTPNETKEQEGYIRVEQFKELLMTLGNRWSEEQANEFLKDINPKSDERINYLDVVKKLMKR
Coiled-coil domain-containing protein 153 S 187 Escherichia Coli Mp020980.2 MSKKSGKGKGKNDGDELGAEKEQVLRTKVESLIQRLGHEQERADRAKAAENELRARLFDLDKDFKNEKDRLFSITSDMTRQYKQMQDELLNQVNDLNKTVIEKDEEIKKKDQQIQDMTKDYEYKLKKKDDEIQDLKRKIEEMSAEFAKMLKDTLDKMQERIEMVQWDSDTDPQMMKRLKDMTGLSNN
Coiled-coil protein, putative B 506 Escherichia Coli Mp020980.2 MALLGKTLKGRSTRPGGIPQKRNIKWRQLAKNQEEFDQLKQLAKMKREGLKARIKDEQKVVTFNKKKLITYWRKIMRIAKTEQLKNEIDIYSQNNQRELDSKEAFIQMLDKNLDEAEDQFQIALRNHLIHIENLMQLQEARMRGLAEEFNRDVNILETEFDLEREEMVKTHKTQLKELEDMIETVKEEDKKKTEEAQNEFSQFKEETKNKNLEETNVMKIILETKQTKYYTELEQMNSKFQSDTSNKVKDHQFYHAHNKNRKQEIDRYLRTISSKKAKIDLMKLKILQHCKEFNARNSALKKEKENISRNYHELKLKMQKFREEESRRLKELSNNSRNAVLKLREYCALGEKILKTAELCRRLETEKEKVLPFYESSVDEDQIPEQLKNEFEHLKKEDAEEYAYLNNFYKRYNKVLLDKLAIEKQKENLQRDNQLLKSLLKQYLDGISLNDDVLKNENNPLLVVNHKFNLGKMPVEKIENKTVIEGVFEVRNTSHQLQGQRAPPFQ
LRRC48 protein C 575 Escherichia Coli Mp020980.2 MSNYISNYVQSTIVTKTVQNKDKKTGKNSVDPRVINEQLILDAVKQFNQENNKITTENIILQQLRQLQLSFKNILKIQHLQGLERLEKLQLDNNIIEKIENIDHLVNLKWLDLSFNCIKKIEGLDKLKELTDLSLFNNYIEKIEGLHNNTKLNVFSIGNNRLKSYEEITLYFGYKPRGEEGTNDRPEFKRLQVLNVSGNPFTKDKENEYKNHIICAIPNLKYLDYVFIDEGDRQLIRQDEQISNSYNFTTTDYYQQMQAQEQKEEMDRQTLKKKKDARMDILDNLKDEYLKIEDLQRVKIIKPNQINEEIEKYCGKINDHVVEMQAAVIQKHQLILQEMSKTEVSYKEQEALHEKETLQILKEFEHEKKVEFRNWEKEAANGDAKKEESRLKTLLQKTTSLKNKLMDIEIQLVEELEAIFTDYDTKKKETAWKDIEEIIVLGQKKIEEENVKFYSNLNVIKNKEEANYNSTQQQQLEEENNEEDDEKASLLENKEQLAQMIGNIKETLIDSHTKIILSAQMELQKDLAEYAKQQKNKMYERNRKNISQIIAQIDAYQTEINEKLKQGDDESDHEN
Growth-arrest-specific microtubule-binding protein D 472 Escherichia Coli Mp020980.2 MSKAAKAKKNVPVVSKLEADARKAAEGVNDNESEEFKKAMRKEARALVEQFNEEKKLLAFYQQERQKINYNWIIAKKELEDKKSELINKEREIQDLQENHFMTLNVYKQKIKHLLFQNQDQQSELKKDVEVTLKQLEDQHRIKSRELKTDVRSLKVTKKEQEISQQDYLFALKSEHDKQMTLMRQDYERQVNDIKRKYDLKMQNLTKEMEEARAAMIKQLEDNKNQKIAEIIKEHTQKYNDIKNYYSEITATNLDYRKTLKNEIKELQTKDEEYKKTLQQTEKGYKELNEPLQALGIEIIQLKKQDEEQEAIIKEKEELKQKIDNQERLFRKLEYEYEVKLQQFQYLERERNALYAKFNQTVFEIHQKSGLENLILEKKVTNLREDLEIKDLQIHQVLTAANIDPNSVGSINKSLEEVESLKNELISELQAQLKQIRKAHSHMVKAYEGKLSEFVIPVEELGFDPLVPTNTD
Growth-arrest-specific microtubule-binding protein E 468 Escherichia Coli Mp020980.2 MPPKKAKGKKKKEEEPDDEYKSMTGADLTQTLEKLKERVNEMRTNRNYIQMDRDMVENFYHNTLKEISEVKTKISNKETEAEEKESKHRIDVKVFLQKVKHLEYEQEKSNLNIEDDGKKAKEKEDAYFEDITKNMKQLKTQLKSEYLEKEKANIQQVQEEKKDHQSLLKIQQKKFDELINNLIIKYEERLAKLKEDLELKLKVEIHELEERKNLHINELMNNHEKAFAELKKYYNDITAENLNLIKAHKEKIAQIYANIQLNTKNVADNQAKNEQLKEPLAKHREIRNKLKEDLKQFAKHKMSLQNLKSKAITLKDKITKLERDGKDLDEKYEKVVREKQELEKKFEDITQEVKKNADLNNNVLSNRLQILLKEYNNKEEELRTIIDNAGLDHNLHEQLKQRVQQSIEAKNTLIKNLKYSIHHATKAYNDAIRVYEAKLVEFGIPIEELGFQPLETITSSMPAGLVSS
Flagellar associated protein F 461 Escherichia Coli Mp020980.2 MLAKKLALARSQGKPDPFKKDEFPLLQHIAVEVVSQNYILYPDLKGVPENVRDTIISKITTDLDILTMAPNIDQESFWQRACKNRWEKSQKSINIEEHGRSWKVAYLERYMEEFLTNIQNADDPNKKQILQAELKAAASWIHTLNLQNINQNIDIDFICKYLPLLTSLTLTYGTKYSGMDYNKQSVGMKLSEAANLGEAIKNCYSLLSLNISANMIDDDLLRFIMAGVNMNISLIELNLSHNKIEDQGARRIAKFLMRNEILLYLNLGNNLIGYEGSRYLAQALKVNKNLQSLNLKLNNLGDKAGKKLFQDLMLNKTLLELDVSGNQFEFETALKLSDYVADSMCGLKVLNIANNDFNDSCYENLKTGFTKNYSLAKLDLRGNKFSKTQEEKEQELKDPFRMFNLSQTEKELTQIIIRHDLTAQKIQFFSESDLDKIKQLKELQGAKQEPEKVIQQDQNKE
Kinase domain protein G 345 Escherichia Coli Mp020980.2 MGDKKGKKKGGGEEDESTLQLSRQYKKKCELNGINPSKLFKEKLDFAVEEDENIEKIHLWEELGPVGVRSIMDSLTEIPYLHTKSIRLWKVKAQDEGTRTICNYMEKSKTIEYLDLMDNQVGSLGCEFLGRVLHPQIEIPLLKLKLDHNEFGTEGLMQLAAGLCMNSVLEKLSLNYCAITAEGSKYIQQILSFVNTNLKKLKMKGNLLKNEGVHQLFRAFKVNKTLEKVDLSDNQFDTTLGDDQDPEANPNFFETNKDAIEHNKQIIENICEVLKAADTLLYYDFRFNNISKTDAKAIIDCLEANKNIYYMELSEHIPKDLIERKKGLMKKRKPKKKKKKKAKKK
Coiled-coil lobo-like protein, putative H 852 Escherichia Coli Mp020980.2 MDHNEGGYSHHQIEGQEGQQQQAPVGGGGEDIFQVLENITQVQNEKLKRCQEFKEQENIPRQYIENSPKEELVLEHVIQFKRQFQYQLYYEDKRDLFLYPKNECDVYKFICTTIRPTKLGFLELYDYQQCSKYLSEFVQYEELDPPNEFPLVIPSPTNVAVWQKGDCFDMSILLCSLLIGVGYDAYCVYGKAPREITTRNESLMECLFLEKGKYIEENDKKPKQTLEQNENALLKKPIAHSKWDQTQETKAREAEEEKRRIALTINDDEPDELLEDPYQGQRVHCWVLLRSGKRDVQQNIFIEPSTGRMYSPSTCPYECVDAVFNNLNFWINMKPECEVKNLNFEEMDSSLNWEYVMLDTLLFNKGNGNDEEGNENIDDPLNKQAQRDPEQEQLQDIAQLLDMPPPWPPKIYIDKEKFLMGTPLGEGTVYYNKVKVDNYAPYSQPDGLVQKITIFQDYKRLKVKEYRYFYKHRSDKLSIRRRYPFEFKTIEEYEPQKYENKTIPQALQQWRQVIQIDRHLRIIKYYHNRNHDGLIERVEQIGEKTMMFYQNRDDRVIYRSIRFDNKRAPSSQNNDKVFQDNHVGDVQITKMTQKFEKNPHYPANEQIQKMVIDLIKDKVIVYYHMNDGEITPIVKIYPRDSMHGFAKLNEPGGDNKIDDPLVQLENTKMVNLEKDCLNQLKQQEKIARDDEKTIREGEIRLEKTLYDKARDRFKESSKKNDDDLAKDAAASDYLYPYLEKRKLLGVSEINAQVAMEIKNEVMQKLKERLLSRAEIIQRRLEEQRQVLEQKEAQVAKRQEIDPKQEEEIRDINFKIDILEQRALRFESMALQKYEEMDNRLNKDARLAALHRK
EF-hand calcium-binding domain protein I 185 Escherichia Coli Mp020980.2 MYDPNTSQTEKQKQEEFLKLKIQEAFNLFVKDKKGIVDKREIPYIMRYLGQFPSEAQVRDAILPEIEEDEPSEFIKYSKFEPYMLKVLKEREYEPDDPEALLAAFKLLDQEGKGYIEIDMMKTFLEKQGIEFREQETKSFIEFATNKDPNATVIYYEDYISRLQAFTDKHIESVMKGYNNFQVKK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-07-14
Deposition Author(s): Bui, K.H. , Ghanaeian, A.G.