PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8T4D

Md65 n332-gt5 sosip in complex with rm_n332_08 fab and rm20a3 fab

PDB DOI: 10.2210/pdb8t4d/pdb

Classification: VIRAL PROTEIN/Immune System
Organism(s): Human Immunodeficiency Virus 1 , Macaca Mulatta

Deposited: 2023-06-09
Deposition Author(s): Ozorowski, G. , Torres, J.L. , Ward, A.B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.1 Å

8t4d
Literature

Md65 n332-gt5 sosip in complex with rm_n332_08 fab and rm20a3 fab

Ozorowski, G. , Torres, J.L. , Ward, A.B.

Primary Citation of Related Structures: 8T4D


Proteins
Molecule Chains Sequence Length Organism Sequence
MD65 N332-GT5 SOSIP gp120 A 481 Human Immunodeficiency Virus 1 , Macaca Mulatta AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNYAPKLRSMMRGEIKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCQNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTSVQINCTRPSNNTVKSIRIGPGQAFYYFGDVLGHVRMAHCNISKATWNETLGKVVKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSLILPCWIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRTVGRRRRRR
MD65 N332-GT5 SOSIP gp120 E 481 Human Immunodeficiency Virus 1 , Macaca Mulatta AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNYAPKLRSMMRGEIKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCQNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTSVQINCTRPSNNTVKSIRIGPGQAFYYFGDVLGHVRMAHCNISKATWNETLGKVVKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSLILPCWIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRTVGRRRRRR
MD65 N332-GT5 SOSIP gp120 F 481 Human Immunodeficiency Virus 1 , Macaca Mulatta AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNYAPKLRSMMRGEIKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCQNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTSVQINCTRPSNNTVKSIRIGPGQAFYYFGDVLGHVRMAHCNISKATWNETLGKVVKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSLILPCWIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRTVGRRRRRR
RM20A3 heavy chain Fv C 125 Human Immunodeficiency Virus 1 , Macaca Mulatta EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS
RM20A3 heavy chain Fv J 125 Human Immunodeficiency Virus 1 , Macaca Mulatta EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS
RM20A3 heavy chain Fv K 125 Human Immunodeficiency Virus 1 , Macaca Mulatta EVQLVETGGGLVQPGGSLKLSCRASGYTFSSFAMSWVRQAPGKGLEWVSLINDRGGLTFYVDSVKGRFTISRDNSKNTLSLQMHSLRDGDTAVYYCATGGMSSALQSSKYYFDFWGQGALVTVSS
RM20A3 light chain Fv D 128 Human Immunodeficiency Virus 1 , Macaca Mulatta ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVLGQPKASPTVTLFPPSSEEL
RM20A3 light chain Fv M 128 Human Immunodeficiency Virus 1 , Macaca Mulatta ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVLGQPKASPTVTLFPPSSEEL
RM20A3 light chain Fv N 128 Human Immunodeficiency Virus 1 , Macaca Mulatta ALTQPPSVSGSPGQSVTISCTGTSSDIGSYNYVSWYQQHPGKAPKLMIYDVTQRPSGVSDRFSGSKSGNTASLTISGLQADDEADYYCSAYAGRQTFYIFGGGTRLTVLGQPKASPTVTLFPPSSEEL
MD65 N332-GT5 SOSIP gp41 B 153 Human Immunodeficiency Virus 1 , Macaca Mulatta AAGIGASSDGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
MD65 N332-GT5 SOSIP gp41 G 153 Human Immunodeficiency Virus 1 , Macaca Mulatta AAGIGASSDGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
MD65 N332-GT5 SOSIP gp41 I 153 Human Immunodeficiency Virus 1 , Macaca Mulatta AAGIGASSDGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
RM_N332_08 heavy chain Fv H 130 Human Immunodeficiency Virus 1 , Macaca Mulatta QVQLVQSGAEVKKPGSSVKVSCKASGYTFTDHYIHWVRQAPRQGLEWMGWINPYNGNTNYAQKFQGRVTLTRDTSTTTVYMELISLRSEDTAVYYCARGGEYCTGFGCFAGKGDNSLDVWGRGVLVSVSS
RM_N332_08 heavy chain Fv O 130 Human Immunodeficiency Virus 1 , Macaca Mulatta QVQLVQSGAEVKKPGSSVKVSCKASGYTFTDHYIHWVRQAPRQGLEWMGWINPYNGNTNYAQKFQGRVTLTRDTSTTTVYMELISLRSEDTAVYYCARGGEYCTGFGCFAGKGDNSLDVWGRGVLVSVSS
RM_N332_08 heavy chain Fv P 130 Human Immunodeficiency Virus 1 , Macaca Mulatta QVQLVQSGAEVKKPGSSVKVSCKASGYTFTDHYIHWVRQAPRQGLEWMGWINPYNGNTNYAQKFQGRVTLTRDTSTTTVYMELISLRSEDTAVYYCARGGEYCTGFGCFAGKGDNSLDVWGRGVLVSVSS
RM_N332_08 light chain Fv L 113 Human Immunodeficiency Virus 1 , Macaca Mulatta DIVMIQTPLSLPVTPGEPASISCRSSQSLFDIEDETTYLEWFLQKPGQSPQPLIYEVSNRASGVPDRFSGSGSDTAFTLKISRVEAEDVGIYYCMQGIEYPFTFGPGTKVEIK
RM_N332_08 light chain Fv Q 113 Human Immunodeficiency Virus 1 , Macaca Mulatta DIVMIQTPLSLPVTPGEPASISCRSSQSLFDIEDETTYLEWFLQKPGQSPQPLIYEVSNRASGVPDRFSGSGSDTAFTLKISRVEAEDVGIYYCMQGIEYPFTFGPGTKVEIK
RM_N332_08 light chain Fv R 113 Human Immunodeficiency Virus 1 , Macaca Mulatta DIVMIQTPLSLPVTPGEPASISCRSSQSLFDIEDETTYLEWFLQKPGQSPQPLIYEVSNRASGVPDRFSGSGSDTAFTLKISRVEAEDVGIYYCMQGIEYPFTFGPGTKVEIK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-06-09
Deposition Author(s): Ozorowski, G. , Torres, J.L. , Ward, A.B.