8RK6
Baseplate core of bacteriophage jbd30 computed in c3 symmetry
PDB DOI: 10.2210/pdb8rk6/pdb
Classification: VIRUS Organism(s): Pseudomonas Phage Jbd30
Deposited: 2023-12-23 Deposition Author(s): Fuzik, T. , Plevka, P. , Valentova, L.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.6 Å
Baseplate core of bacteriophage jbd30 computed in c3 symmetry
Fuzik, T. , Plevka, P. , Valentova, L.
Primary Citation of Related Structures: 8RK6
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DUF2163 domain-containing protein | I | 273 | Pseudomonas Phage Jbd30 | MSFNSRESSLADGQPVRLYQFSRGAIRWSYNSSDRDITYQNQIFRTVPGGITDNGIICSGDPQSDQFVITAPADLDVALLYKTRSPSDAIDLVVYDMHYGDAEAAVSWVGQIGDVDWPTVDSCRITCVSEDELMDQPGLTDTYCRTCTAIVGDHRCKVNLVPYRVTLTPQSVSAWVISSGVVAGYADGWFTGGYVEWQVDGDNYDRRFIEQHAGADLHILGGTEGIPAGGQLRVYPGCDGLAQTCDDKFSNLPNFRGFNAMQGKSPFDGDQVW |
| Virion structural protein | C | 567 | Pseudomonas Phage Jbd30 | MATFPGFQVPKPVEGIVAGITPNIDALELNQDISLAAVAASTWGGAYGAHQPVEVIHSTYQAVHQSALEENYYNRLWLIPTAMELGNVVSTQIRPASVWNAYFSPRTLTAIDREAADGITLSGQASPPLGFAALEERTWTVSIGTDGPPVVNARIVWRLQGEPNLVLVITGNRIIAWTFAPDWGDSIVERLSASTNILQSESAVTQRRAMRLAPRREFDANMYAVDRERQLLDMTLFGWGARIWALPIWPDIQLLHQPLAAGSLGIPCDTAGLDFRDGGLAMLRGEDAFTYEVVEVKTVTASGLDLVRPVQAAWGTGSRLYPVRTAQLTEQPTLTRLTDTAQSARVSFLVMEPSAWPELMPATTYRGRPVLEQRPDESEDLTSSYQRLLSTLDNGSAIPRVTDVAGMALPVIGHRWIGMGRAERSAFRSLVYALRGQQKPLWVPTHADDLTLVATVSQLSTALDVRNIGYARFANGRPGRRDIRIELYDGTVYHRRILTSTELDADTERVAIDAALGRLVEPTDVARICFMALCSAASDVVEIEHVTDSEGVATAALTFKGVRDDEF |
| Tip attachment protein J domain-containing protein | M | 735 | Pseudomonas Phage Jbd30 | MGAKPKAQTVGWRYYFDIHFALGKKVDEVCAIRASGKTAWKGSITSNGQVRINAPELFGGDKGEGGLDGTLDVLFGEEDQGVLPRLAAMLGGLVPAFRGVTTCFYSGLVTSVNPYPKKWEILRRGGNRLWDGNPWYPEKQFVWLADGQIKAMNPAHILYLVYTGRDFRGLARTRMDEASWRAAADTLYAEGFGLCFEWTRSDSFKNFCETVKSHIGAEVYPNRQTGQISIRLLRDDYNVADLPLFDEDSGLLEITQEKTGSTSLAPSQLIVKYIDQIDGAQRQIIVNNNAVAASQGRRSSEEIEFLGVPTGELAGRVGEREMRLKTTGLKRYKGVFDRRARSLNPGQPFLIRSTPRGIPETVVRVGRIEDNFLGDGKITLTVVQDQFNLPATTGVAPPPPGWTPPDRTPRAITVRRLIEAPYRELAGVIDPANLQLLDVSASYLAALAEAPTSLSQSYTLTDRVGSSGAFVDRGTGDWCPTGLLAAELPLAAGPNVVTLTNATRLEDVTVGQAAVVDDEIVRVDAVNYASGTVTLARGCADTVPAKHLAGARVWFYDTFEAVDETVYSQGVTLQARLLTNTSEGQLAPALAATDSLTLTGRQGKPYPPGQFRINGSAYPTKVYGALSVSWAKRDRIGQADQLIDTTVGNIGPEDGATVTLQVYSGTTLKRTYAGLTSSSWSYPLAEDMADGPLQDVRLVLRSVRDGIDSWQQHDITIERHGLGFRLGEELGGVSA |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2023-12-23 Deposition Author(s): Fuzik, T. , Plevka, P. , Valentova, L.