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8RJA

Crystal structure of the f420-reducing formylmethanofuran dehydrogenase complex from the ethanotroph candidatus ethanoperedens thermophilum

PDB DOI: 10.2210/pdb8rja/pdb

Classification: OXIDOREDUCTASE
Organism(s): Candidatus Methanoperedenaceae Archaeon Gb50

Deposited: 2023-12-20
Deposition Author(s): Lemaire, O.N. , Wagner, T.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.97 Å

8rja
Literature

Crystal structure of the f420-reducing formylmethanofuran dehydrogenase complex from the ethanotroph candidatus ethanoperedens thermophilum

Lemaire, O.N. , Wagner, T.

Primary Citation of Related Structures: 8RJA


Proteins
Molecule Chains Sequence Length Organism Sequence
Formylmethanofuran dehydrogenase subunit A A 567 Candidatus Methanoperedenaceae Archaeon Gb50 MSELLIKNGKVFDPINGVKGDLMDIAIKDGKIVESVSSGAKVIDASGMTVMAGGVDAHSHIAGGKVNVGRIMRPDDGRSGLKPRTKITRPCSGYTVPNTFAMGYRYAELGYTTAFEAAIPILKARHTHEEFEDIPIIDKGGLTLFGSNWQVMDAVREGDLEKLAAYVAWGLRASRGYGVKIVNPGGGEAWGFGKNVRGLDDPVPGFDVTPSEIILALARANEMLNLPHSIHLHCNRLGTPGNYETTIETMRRLEKIKPSRDRQVVHVTHVTFNAWGGTHFGNFESKADAVAEYLNKSDHVTIDMGQLIFGNATTMTADGPVQYANARLLGAKWGNGDVELEDASGVVPLFYMRKMYVHDIMWAIGLELALLTNDPWQVLLTTDHPNGGPFVNYPEVIALLMSAKKREEEIAKLSDKMQERTCLSGIDREFDWYDIAIKTRAAHAKILGLHEYGKGHLGVGADGDVTIYNINTESVDPSVEHAAVKKAFQLPAYTIKGGEIVAKEGEITATPTGRTFWVDARVPEEYTTRMMKDLEWKFRKYYSVKMANYMVQDEYVQHPVVLEAGVN
Formylmethanofuran dehydrogenase subunit A G 567 Candidatus Methanoperedenaceae Archaeon Gb50 MSELLIKNGKVFDPINGVKGDLMDIAIKDGKIVESVSSGAKVIDASGMTVMAGGVDAHSHIAGGKVNVGRIMRPDDGRSGLKPRTKITRPCSGYTVPNTFAMGYRYAELGYTTAFEAAIPILKARHTHEEFEDIPIIDKGGLTLFGSNWQVMDAVREGDLEKLAAYVAWGLRASRGYGVKIVNPGGGEAWGFGKNVRGLDDPVPGFDVTPSEIILALARANEMLNLPHSIHLHCNRLGTPGNYETTIETMRRLEKIKPSRDRQVVHVTHVTFNAWGGTHFGNFESKADAVAEYLNKSDHVTIDMGQLIFGNATTMTADGPVQYANARLLGAKWGNGDVELEDASGVVPLFYMRKMYVHDIMWAIGLELALLTNDPWQVLLTTDHPNGGPFVNYPEVIALLMSAKKREEEIAKLSDKMQERTCLSGIDREFDWYDIAIKTRAAHAKILGLHEYGKGHLGVGADGDVTIYNINTESVDPSVEHAAVKKAFQLPAYTIKGGEIVAKEGEITATPTGRTFWVDARVPEEYTTRMMKDLEWKFRKYYSVKMANYMVQDEYVQHPVVLEAGVN
Formylmethanofuran dehydrogenase subunit B B 430 Candidatus Methanoperedenaceae Archaeon Gb50 MVEITDAICSFCGSLCDDLTVKVEDNRIVDVRRACRLGAKKILGHERIPAPMIRDGSGELVEASYDEAIDRAAEILAGSKRPLLYGWASTSCEAQSKGILLAEIIGGVIDNTASVCHGPSTLAVQEKGLPTASLGQMKNRADLVIFWGCNPVHAHPRHMSRYSVYKKGFFLDRGRQNRKFVTVDVRMTDTAAISDEFIQIEQGSDYLIVSAIRALVNGKGDVVPETVAGVPKEELARVAEMMTSCRFGMILYGMGLTQSRSKYKNIDIALSLINDLNTKTKFVITPMRGHYNVTGFGQVCSWQTGFPTVDLARGVPYYNPGEMSANDLLMRDEVDSAMIIAGDAGAHFPAASIRNLAKVPLVQIDPYPNATTELANVVIPAAIVGIECEGTAYRMDGVSLRMRKLVESDYLSDEEILDRIIEKVRVIKGE
Formylmethanofuran dehydrogenase subunit B H 430 Candidatus Methanoperedenaceae Archaeon Gb50 MVEITDAICSFCGSLCDDLTVKVEDNRIVDVRRACRLGAKKILGHERIPAPMIRDGSGELVEASYDEAIDRAAEILAGSKRPLLYGWASTSCEAQSKGILLAEIIGGVIDNTASVCHGPSTLAVQEKGLPTASLGQMKNRADLVIFWGCNPVHAHPRHMSRYSVYKKGFFLDRGRQNRKFVTVDVRMTDTAAISDEFIQIEQGSDYLIVSAIRALVNGKGDVVPETVAGVPKEELARVAEMMTSCRFGMILYGMGLTQSRSKYKNIDIALSLINDLNTKTKFVITPMRGHYNVTGFGQVCSWQTGFPTVDLARGVPYYNPGEMSANDLLMRDEVDSAMIIAGDAGAHFPAASIRNLAKVPLVQIDPYPNATTELANVVIPAAIVGIECEGTAYRMDGVSLRMRKLVESDYLSDEEILDRIIEKVRVIKGE
formylmethanofuran dehydrogenase C 253 Candidatus Methanoperedenaceae Archaeon Gb50 MQTVTLTPRKSSKISVEAETITPDNFAGKTVEEIEKVTVWEGNNKTTLGEFFEVALDGSDTPENTKIVIEGSIPRVKRVGEGMSAGIILINGDVDMHVGAKMRGGRITVKGNADSWAGREMKGGELIIEGNAEYYLGAGYRGESCGMRGGRITVFGNARDYVGEHMCGGEIIIKGNAGLMPGISNNGGKIIIEGNTTMPGGEMKKGTIIINGRVDELVPVYQQEEDEELDGVSYKKYTGDVVAGGKGTLYIKA
formylmethanofuran dehydrogenase I 253 Candidatus Methanoperedenaceae Archaeon Gb50 MQTVTLTPRKSSKISVEAETITPDNFAGKTVEEIEKVTVWEGNNKTTLGEFFEVALDGSDTPENTKIVIEGSIPRVKRVGEGMSAGIILINGDVDMHVGAKMRGGRITVKGNADSWAGREMKGGELIIEGNAEYYLGAGYRGESCGMRGGRITVFGNARDYVGEHMCGGEIIIKGNAGLMPGISNNGGKIIIEGNTTMPGGEMKKGTIIINGRVDELVPVYQQEEDEELDGVSYKKYTGDVVAGGKGTLYIKA
Formylmethanofuran dehydrogenase subunit D D 126 Candidatus Methanoperedenaceae Archaeon Gb50 MKRDVNIVTGRTIKQGADIENKLSREYFEACARCEVGPEDLRALGISEGSNVRISTDFGSVVVPVALCEGNPTGIVFIPMGPWANAVVNPDTHGCGMPGFKGVPGTIEPTDDTPLDLKSLMKLYKE
Formylmethanofuran dehydrogenase subunit D J 126 Candidatus Methanoperedenaceae Archaeon Gb50 MKRDVNIVTGRTIKQGADIENKLSREYFEACARCEVGPEDLRALGISEGSNVRISTDFGSVVVPVALCEGNPTGIVFIPMGPWANAVVNPDTHGCGMPGFKGVPGTIEPTDDTPLDLKSLMKLYKE
Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus E 359 Candidatus Methanoperedenaceae Archaeon Gb50 MMNGYDQLVEEVIDAGICVSCGNCAAVCPLQYISMEEKKPVQDREKRDEIEKRSGLACNDCNLCAMSCPRIEPTYFWQKRELKRMEHEGEVKAARTTYKPIQDVCQDGGIVTTLFKYLLDSGRVDGVVVSQYNGDYNPVPVLAKREDDLLRAAGTRYTVSPAYSPLTDIKQLKDDGYERIAIVGTPCQIYALRKTQAIYNSQRLLIPHNIITFAIGLFCAEEFDDRILQDLEVDIADVTGFDVKKEGLIISLKSGEKKIIPHEDLEEYVREGCKICSDFNSPYADISVGSVGSPPGWSTVIVRTETGREIYQKLLEKGLIEETTVDEKGLKLIDKMAQKKINNAQTKIKERSNKESEEE
Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus K 359 Candidatus Methanoperedenaceae Archaeon Gb50 MMNGYDQLVEEVIDAGICVSCGNCAAVCPLQYISMEEKKPVQDREKRDEIEKRSGLACNDCNLCAMSCPRIEPTYFWQKRELKRMEHEGEVKAARTTYKPIQDVCQDGGIVTTLFKYLLDSGRVDGVVVSQYNGDYNPVPVLAKREDDLLRAAGTRYTVSPAYSPLTDIKQLKDDGYERIAIVGTPCQIYALRKTQAIYNSQRLLIPHNIITFAIGLFCAEEFDDRILQDLEVDIADVTGFDVKKEGLIISLKSGEKKIIPHEDLEEYVREGCKICSDFNSPYADISVGSVGSPPGWSTVIVRTETGREIYQKLLEKGLIEETTVDEKGLKLIDKMAQKKINNAQTKIKERSNKESEEE
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic F 85 Candidatus Methanoperedenaceae Archaeon Gb50 MANQMSFKKVKVSEECVGCGVCETVCPVNNLLEDGAEFDPDRAKLAIKVTNGEAAVDEEVCLTCGTCTFNCPSGAVYAEYEPRAS
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic L 85 Candidatus Methanoperedenaceae Archaeon Gb50 MANQMSFKKVKVSEECVGCGVCETVCPVNNLLEDGAEFDPDRAKLAIKVTNGEAAVDEEVCLTCGTCTFNCPSGAVYAEYEPRAS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-12-20
Deposition Author(s): Lemaire, O.N. , Wagner, T.