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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8RC2

Dna bound type iv-a3 crispr effector complex from k. pneumoniae

PDB DOI: 10.2210/pdb8rc2/pdb

Classification: GENE REGULATION
Organism(s): Klebsiella Pneumoniae , Synthetic Construct

Deposited: 2023-12-05
Deposition Author(s): Cepaite, R. , Malinauskaite, L. , Miksys, A. , Pausch, P.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.1 Å

8rc2
Literature

Dna bound type iv-a3 crispr effector complex from k. pneumoniae

Cepaite, R. , Malinauskaite, L. , Miksys, A. , Pausch, P.

Primary Citation of Related Structures: 8RC2


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR type AFERR-associated protein Csf2 A 350 Klebsiella Pneumoniae , Synthetic Construct MRTLNFNGKISTLEPLTVTVKNAVSTSGHRLPRNGGFNAAPYFPGTSIRGTLRHAAHKVIVDRVGLNADGKSPFDLAEHFMLAQGVDINGEAETFAPGEINAGAELRSKNPLISLFGRWGLSGKVGIGNAIPDGDNQWGMFGGGARSIMFQRDESLMEFLETDQVDRLERLLEEQAEASVDISQIKTEQDALKKAMKSADKDTKAELQIKVRELDEKIQARKDQKQESRESIRRPIDPYEAFITGAELSHRMSIKNATDEEAGLFISALIRFAAEPRFGGHANHNCGLVEAHWTVTTWKPGELVPVTLGEIVITPNGVEITGDELFAMVKAFNENQSFDFTARGHHHHHH
CRISPR type AFERR-associated protein Csf2 B 350 Klebsiella Pneumoniae , Synthetic Construct MRTLNFNGKISTLEPLTVTVKNAVSTSGHRLPRNGGFNAAPYFPGTSIRGTLRHAAHKVIVDRVGLNADGKSPFDLAEHFMLAQGVDINGEAETFAPGEINAGAELRSKNPLISLFGRWGLSGKVGIGNAIPDGDNQWGMFGGGARSIMFQRDESLMEFLETDQVDRLERLLEEQAEASVDISQIKTEQDALKKAMKSADKDTKAELQIKVRELDEKIQARKDQKQESRESIRRPIDPYEAFITGAELSHRMSIKNATDEEAGLFISALIRFAAEPRFGGHANHNCGLVEAHWTVTTWKPGELVPVTLGEIVITPNGVEITGDELFAMVKAFNENQSFDFTARGHHHHHH
CRISPR type AFERR-associated protein Csf2 C 350 Klebsiella Pneumoniae , Synthetic Construct MRTLNFNGKISTLEPLTVTVKNAVSTSGHRLPRNGGFNAAPYFPGTSIRGTLRHAAHKVIVDRVGLNADGKSPFDLAEHFMLAQGVDINGEAETFAPGEINAGAELRSKNPLISLFGRWGLSGKVGIGNAIPDGDNQWGMFGGGARSIMFQRDESLMEFLETDQVDRLERLLEEQAEASVDISQIKTEQDALKKAMKSADKDTKAELQIKVRELDEKIQARKDQKQESRESIRRPIDPYEAFITGAELSHRMSIKNATDEEAGLFISALIRFAAEPRFGGHANHNCGLVEAHWTVTTWKPGELVPVTLGEIVITPNGVEITGDELFAMVKAFNENQSFDFTARGHHHHHH
CRISPR type AFERR-associated protein Csf2 D 350 Klebsiella Pneumoniae , Synthetic Construct MRTLNFNGKISTLEPLTVTVKNAVSTSGHRLPRNGGFNAAPYFPGTSIRGTLRHAAHKVIVDRVGLNADGKSPFDLAEHFMLAQGVDINGEAETFAPGEINAGAELRSKNPLISLFGRWGLSGKVGIGNAIPDGDNQWGMFGGGARSIMFQRDESLMEFLETDQVDRLERLLEEQAEASVDISQIKTEQDALKKAMKSADKDTKAELQIKVRELDEKIQARKDQKQESRESIRRPIDPYEAFITGAELSHRMSIKNATDEEAGLFISALIRFAAEPRFGGHANHNCGLVEAHWTVTTWKPGELVPVTLGEIVITPNGVEITGDELFAMVKAFNENQSFDFTARGHHHHHH
CRISPR type AFERR-associated protein Csf2 E 350 Klebsiella Pneumoniae , Synthetic Construct MRTLNFNGKISTLEPLTVTVKNAVSTSGHRLPRNGGFNAAPYFPGTSIRGTLRHAAHKVIVDRVGLNADGKSPFDLAEHFMLAQGVDINGEAETFAPGEINAGAELRSKNPLISLFGRWGLSGKVGIGNAIPDGDNQWGMFGGGARSIMFQRDESLMEFLETDQVDRLERLLEEQAEASVDISQIKTEQDALKKAMKSADKDTKAELQIKVRELDEKIQARKDQKQESRESIRRPIDPYEAFITGAELSHRMSIKNATDEEAGLFISALIRFAAEPRFGGHANHNCGLVEAHWTVTTWKPGELVPVTLGEIVITPNGVEITGDELFAMVKAFNENQSFDFTARGHHHHHH
CRISPR type AFERR-associated protein Csf2 L 350 Klebsiella Pneumoniae , Synthetic Construct MRTLNFNGKISTLEPLTVTVKNAVSTSGHRLPRNGGFNAAPYFPGTSIRGTLRHAAHKVIVDRVGLNADGKSPFDLAEHFMLAQGVDINGEAETFAPGEINAGAELRSKNPLISLFGRWGLSGKVGIGNAIPDGDNQWGMFGGGARSIMFQRDESLMEFLETDQVDRLERLLEEQAEASVDISQIKTEQDALKKAMKSADKDTKAELQIKVRELDEKIQARKDQKQESRESIRRPIDPYEAFITGAELSHRMSIKNATDEEAGLFISALIRFAAEPRFGGHANHNCGLVEAHWTVTTWKPGELVPVTLGEIVITPNGVEITGDELFAMVKAFNENQSFDFTARGHHHHHH
CRISPR type AFERR-associated protein Csf3 F 235 Klebsiella Pneumoniae , Synthetic Construct MLNFKPYRVIMSSLTPVVISGIAPSLDGILYEALSQAIPSNEPGVVLARLKEILLFNDELGVFHASSLRFGITPEQGIGATTSMRCDYLSPEKLSTAMFSPRTRRGLFTRVLLTGGPTKRRMTTRPAYSAPYLTFDFVGSSEAVEILLNHAHVGVGYDYFSAANGEFNNVTILPLDIDTSISNEGMALRPVPVNSGLNGIKGVSPLIPPYFVGEKLNIVHPAPVRTQLISSLLRG
CRISPR type AFERR-associated protein Csf1 G 263 Klebsiella Pneumoniae , Synthetic Construct MNHPVESVYSALTSILLPYMGEPVPVQRNCSCCGRAPSEFDGVGFELVNAYRERVVHCRPCQTFFVSAPELMGVENPKKPTTGQKFGMWSGVGAVINVEDNSSVLLAPQGVVNKLPEHFFDHVEVITATSGQHLEYLFNTELKFPLIYIQNFGVKTYELVRSLRVSLSADAIYTCADQLLTRQNEVLYMLDLKKAKELHQEIKNYSKKEMDIFIRTVTLLAYSRITPEAASNEFKKNNLIPLLLLLPTDPHQRLSILHLLKKV

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
crRNA h 61 NA UUAUCGGCGAGACCGGGAUGCACCUCCCGAAGGGUCUCGGUGUUUCCCCUGCGUGCGGGGG
Target Strand (TS)-DNA i 60 NA CCCTCCCTCCAGCTTCCGAGACCCTTCGGGAGGTGCATCCCGGTCTCGCTTGGCCTCCTC
Non-Target Strand (NTS)-DNA j 60 NA GAGGAGGCCAAGATCTCAATTTCGTACAAGAAATCCTTTGAGATGAAGCTGGAGGGAGGG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-12-05
Deposition Author(s): Cepaite, R. , Malinauskaite, L. , Miksys, A. , Pausch, P.