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8RBU
Crystal structure of hla-a*11:01 in complex with svlndilarl, an 10-mer epitope from sars-cov-2 spike (s975-984)
PDB DOI: 10.2210/pdb8rbu/pdb
Classification: IMMUNE SYSTEM Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2023-12-05 Deposition Author(s): Ahn, Y.M. , Gras, S. , Maddumage, J.C. , Szeto, C.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.7 Å
Crystal structure of hla-a*11:01 in complex with svlndilarl, an 10-mer epitope from sars-cov-2 spike (s975-984)
Ahn, Y.M. , Gras, S. , Maddumage, J.C. , Szeto, C.
Primary Citation of Related Structures: 8RBU
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| HLA class I histocompatibility antigen | A | 365 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRKGGSYTQAASSDSAQGSDVSLTACKV |
| Beta-2-microglobulin | B | 100 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
| Spike protein S2' | C | 10 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | SVLNDILARL |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2023-12-05 Deposition Author(s): Ahn, Y.M. , Gras, S. , Maddumage, J.C. , Szeto, C.