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FASTA Sequence PDB Format mmCIF Format
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8R9Z

S1b domain of the pdcov spike glycoprotein in complex with the 67b12 and 46e6 antibody fab fragments

PDB DOI: 10.2210/pdb8r9z/pdb

Classification: VIRAL PROTEIN
Organism(s): Homo Sapiens , Porcine Deltacoronavirus

Deposited: 2023-11-30
Deposition Author(s): Debski-Antoniak, O. , Hurdiss, D.L.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.9 Å

8r9z
Literature

S1b domain of the pdcov spike glycoprotein in complex with the 67b12 and 46e6 antibody fab fragments

Debski-Antoniak, O. , Hurdiss, D.L.

Primary Citation of Related Structures: 8R9Z


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein A 114 Homo Sapiens , Porcine Deltacoronavirus LEVVQLNISAHMDFGEARLDSVTINGNTSYCVTKPYFRLETNFMCTGCTMNLRTDTCSFDLSAVNNGMSFSQFCLSTESGACEMKIIVTYVWNYLLRQRLYVTAVEGQTHTGTT
67B12 antibody heavy chain B 218 Homo Sapiens , Porcine Deltacoronavirus VQLVQSGAEVKKPGSSVKVSCKASGGTFSSLAISWVRQAPGQGLEWMGGIIPTFGTTNYAQNFRGRVTITADKSTSTAYMELSTLISEDTAVYFCARERSTDTWPGDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLLGQTYICNVNHKPSNTKVDKKVEPK
67B12 antibody light chain C 209 Homo Sapiens , Porcine Deltacoronavirus EILMTQSPATLSVSPGERATLSCWASQSVNSKLAWYQQKPGQAPRLLIYDTSTRATGIPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNYWPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSF
46E6 antibody heavy chain H 219 Homo Sapiens , Porcine Deltacoronavirus QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVIWRDGSNEFYADSVKGRFTISRDNSKDTLYLQMNSLRAEDTAVYYCARRGIIMVRGLLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
46E6 antibody heavy chain L 212 Homo Sapiens , Porcine Deltacoronavirus DIQMTQSPPSLSASVGDRVTITCRASQGISNYLAWHQQKPGKVPKLLIYTASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-11-30
Deposition Author(s): Debski-Antoniak, O. , Hurdiss, D.L.