PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8QOT

Structure of the mu opioid receptor bound to the antagonist nanobody nbe

PDB DOI: 10.2210/pdb8qot/pdb

Classification: MEMBRANE PROTEIN
Organism(s): Lama Glama , Mus Musculus , Synthetic Construct

Deposited: 2023-09-29
Deposition Author(s): Ballet, S. , Boland, A. , Kumar, A. , Manglik, A. , Martin, C. , Raia, P. , Stoeber, M. , Yu, J. , Zhang, X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.2 Å

8qot
Literature

Structure of the mu opioid receptor bound to the antagonist nanobody nbe

Ballet, S. , Boland, A. , Kumar, A. , Manglik, A. , Martin, C. , Raia, P. , Stoeber, M. , Yu, J. , Zhang, X.

Primary Citation of Related Structures: 8QOT


Proteins
Molecule Chains Sequence Length Organism Sequence
Mu-type opioid receptor A 482 Lama Glama , Mus Musculus , Synthetic Construct MKTIIALSYIFCLVFADYKDDDDAMGPGNISDCSDPLAPASCSPAPGSWLNLSHVDGNQSDPCGPNRTGLGENLYFQGSHSLCPQTGSPSMVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSVNYLMGTWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFCIPTSSTILEVLFQGPEQQNSARIRQNTREHPSTANTVDRTNHQLENLEAETAPLPSSLAEENLYFQSWSHPQFEKGGGSGGGSGGGSWSHPQFEKGAHHHHHHHH
Nanobody E (NbE) B 171 Lama Glama , Mus Musculus , Synthetic Construct VKKLLFAIPLVVPFYAAQPAMAQVQLVESGGGLVQAGGSLRLSCAASGSISSISTMGWYRQAPGKERELVAAITSGGSTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNFKYYSGSYFYKSEYDYWGKGTPVTVSSAAAHHHHHHGAAEQKLISEEDLNGAA
NabFab HC H 262 Lama Glama , Mus Musculus , Synthetic Construct MKKNIAFLLASMFVFSIATNAYAEISEVQLVESGGGLVQPGGSLRLSCAASGFNFSYYSIHWVRQAPGKGLEWVAYISSSSSYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYQYWQYHASWYWNGGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
NabFab LC L 238 Lama Glama , Mus Musculus , Synthetic Construct MKKNIAFLLASMFVFSIATNAYASDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Anti-Fab Nanobody K 159 Lama Glama , Mus Musculus , Synthetic Construct MKYLLPTAAAGLLLLAAQPAMAMHHHHHHGENLYFQGSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-09-29
Deposition Author(s): Ballet, S. , Boland, A. , Kumar, A. , Manglik, A. , Martin, C. , Raia, P. , Stoeber, M. , Yu, J. , Zhang, X.