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8Q42

Crystal structure of ca4-bound can2 (e341a) in complex with oligo-a dna

PDB DOI: 10.2210/pdb8q42/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Bdellovibrio Bacteriovorus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2023-08-04
Deposition Author(s): Jinek, M. , Jungfer, K. , Sigg, A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.97 Å

8q42
Literature

Crystal structure of ca4-bound can2 (e341a) in complex with oligo-a dna

Jinek, M. , Jungfer, K. , Sigg, A.

Primary Citation of Related Structures: 8Q42


Proteins
Molecule Chains Sequence Length Organism Sequence
DUF1887 family protein A 439 Bdellovibrio Bacteriovorus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SNMNEKVLVLIVGTNPLPNYVVGSHLKEKYDKFVLIYSEKNDKINQNSTYDYAKKLKEHLNLNDKCIFLPLSDVSNSEKIINDLREKFPSEDFVEVHLNYTGGTKTMVVHIYNFLKEKFKNNKIKFEGSYLDARDYKLVYDYSEEAISLKDTIKIDINTLLSIHLYEDIHFEFYDTYSYKQKFVDSFDKISQEIEKAIKDDKGEDFVKWLEDPFRKIFKGENKLLEKTAKFKKHIEKLLKDNDSSPIVKFNEKTPQFIWDILNAFPEGKKLNDGQKLWIPDDKITNDNLSSRVKDTVEFLNGKWFEWYVYSQIKSELLDRKLKEGEHFGISLKAQKKDSPYFALDIFLINGYQLIGISLTTSSTRELCKLKGFEVIHRVRQIGGDESKAILITGMDKSKTEDLQKDLAYETGSTQKRFVVFGIDDWADIGSKICEEVFK
DUF1887 family protein B 439 Bdellovibrio Bacteriovorus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SNMNEKVLVLIVGTNPLPNYVVGSHLKEKYDKFVLIYSEKNDKINQNSTYDYAKKLKEHLNLNDKCIFLPLSDVSNSEKIINDLREKFPSEDFVEVHLNYTGGTKTMVVHIYNFLKEKFKNNKIKFEGSYLDARDYKLVYDYSEEAISLKDTIKIDINTLLSIHLYEDIHFEFYDTYSYKQKFVDSFDKISQEIEKAIKDDKGEDFVKWLEDPFRKIFKGENKLLEKTAKFKKHIEKLLKDNDSSPIVKFNEKTPQFIWDILNAFPEGKKLNDGQKLWIPDDKITNDNLSSRVKDTVEFLNGKWFEWYVYSQIKSELLDRKLKEGEHFGISLKAQKKDSPYFALDIFLINGYQLIGISLTTSSTRELCKLKGFEVIHRVRQIGGDESKAILITGMDKSKTEDLQKDLAYETGSTQKRFVVFGIDDWADIGSKICEEVFK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*AP*AP*AP*A)-3') d 6 NA AAAAAA
Cyclic tetraadenosine monophosphate (cA4) x 4 NA AAAA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-08-04
Deposition Author(s): Jinek, M. , Jungfer, K. , Sigg, A.