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8Q3E

High resolution structure of nucleosome core with bound foamy virus gag peptide

PDB DOI: 10.2210/pdb8q3e/pdb

Classification: DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2023-08-04
Deposition Author(s): Batchelor, L.K. , Davey, C.A. , De Falco, L. , Dyson, P.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.174 Å

Literature

High resolution structure of nucleosome core with bound foamy virus gag peptide

Batchelor, L.K. , Davey, C.A. , De Falco, L. , Dyson, P.J.

Primary Citation of Related Structures: 8Q3E


Proteins
Molecule Chains Sequence Length Organism Sequence
GLY-GLY-TYR-ASN-LEU-ARG-PRO-ARG-THR-TYR-GLN-PRO-GLN-ARG-TYR-GLY-GLY-GLY MMM 18 Homo Sapiens , Synthetic Construct GGYNLRPRTYQPQRYGGG
Histone H3.1 AAA 98 Homo Sapiens , Synthetic Construct PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H3.1 EEE 98 Homo Sapiens , Synthetic Construct PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H4 BBB 87 Homo Sapiens , Synthetic Construct KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H4 FFF 87 Homo Sapiens , Synthetic Construct KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A type 1-B/E CCC 107 Homo Sapiens , Synthetic Construct KAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
Histone H2A type 1-B/E GGG 107 Homo Sapiens , Synthetic Construct KAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
Histone H2B type 1-K DDD 95 Homo Sapiens , Synthetic Construct RSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Histone H2B type 1-K HHH 95 Homo Sapiens , Synthetic Construct RSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (145-MER) iii 145 NA ATCAATATCCACCTGCAGATACTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGAATCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGTATCTGCAGGTGGATATTGAT
DNA (145-MER) jjj 145 NA ATCAATATCCACCTGCAGATACTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGATTCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGTATCTGCAGGTGGATATTGAT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-08-04
Deposition Author(s): Batchelor, L.K. , Davey, C.A. , De Falco, L. , Dyson, P.J.