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FASTA Sequence PDB Format mmCIF Format
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8PMQ

Catalytic module of yeast gid e3 ligase bound to multiphosphorylated ubc8~ubiquitin

PDB DOI: 10.2210/pdb8pmq/pdb

Classification: LIGASE
Organism(s): Homo Sapiens , Saccharomyces Cerevisiae

Deposited: 2023-06-29
Deposition Author(s): Chrustowicz, J. , Prabu, R.J. , Schulman, B.A. , Sherpa, D.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.53 Å

8pmq
Literature

Catalytic module of yeast gid e3 ligase bound to multiphosphorylated ubc8~ubiquitin

Chrustowicz, J. , Prabu, R.J. , Schulman, B.A. , Sherpa, D.

Primary Citation of Related Structures: 8PMQ


Proteins
Molecule Chains Sequence Length Organism Sequence
E3 ubiquitin-protein ligase RMD5 2 421 Homo Sapiens , Saccharomyces Cerevisiae MSELLDSFETEFAKFYTDSNLEETNLQKCLDHTHEFKSQLKKLKAHLNKHIQESKPEVYNKLSDKEKQKFKRKRELIIEKLSKSQRQWDHSVKKQIKYVSQQSNRFNKSTLNKLKEFDIDSVYVNKLPKETMENVNEAIGYHILRYSIDNMPLGNKNEAFQYLKDVYGITNKESTEFIEMGQIVHDLKKGDTESCLKWCSNEMESLSSNHTALSSLKFDLYTLSAMQIVKHGNPVELYYQITQNAPLDCFRHREKELMQNVVPLLTKSLIGQPIEDIDSKVNKELKECTSLFIKEYCAAKHIFFDSPLFLIVLSGLISFQFFIKYKTIRELAHVDWTTKDELPFDVKLPDFLTHFHPIFICPVLKEETTTENPPYSLACHHIISKKALDRLSKNGTITFKCPYCPVNTSMSSTKKVRFVML
Protein FYV10 9 516 Homo Sapiens , Saccharomyces Cerevisiae MAEKSIFNEPDVDFHLKLNQQLFHIPYELLSKRIKHTQAVINKETKSLHEHTAALNQIFEHNDVEHDELALAKITEMIRKVDHIERFLNTQIKSYCQILNRIKKRLEFFHELKDIKSQNSGTSHNGNNEGTRTKLIQWYQSYTNILIGDYLTRNNPIKYNSETKDHWNSGVVFLKQSQLDDLIDYDVLLEANRISTSLLHERNLLPLISWINENKKTLTKKSSILEFQARLQEYIELLKVDNYTDAIVCFQRFLLPFVKSNFTDLKLASGLLIFIKYCNDQKPTSSTSSGFDTEEIKSQSLPMKKDRIFQHFFHKSLPRITSKPAVNTTDYDKSSLINLQSGDFERYLNLLDDQRWSVLNDLFLSDFYSMYGISQNDPLLIYLSLGISSLKTRDCLHPSDDENGNQETETATTAEKEVEDLQLFTLHSLKRKNCPVCSETFKPITQALPFAHHIQSQLFENPILLPNGNVYDSKKLKKLAKTLKKQNLISLNPGQIMDPVDMKIFCESDSIKMYPT
Ubiquitin-conjugating enzyme E2-24 kDa E 218 Homo Sapiens , Saccharomyces Cerevisiae MSSSKRRIETDVMKLLMSDHQVDLINDSMQEFHVKFLGPKDTPYENGVWRLHVELPDNYPYKSPSIGFVNKIFHPNIDIASGSIKLDVINSTWSPLYDLINIVEWMIPGLLKEPNGSDPLNNEAATLQLRDKKLYEEKIKEYIDKYATKEKYQQMFGGDNDSDDSDSGGDLQEEDSDSDEDMDGTGVSSGDDSVDELSEDLSDIDVSDDDDYDEVANQ
Ubiquitin U 76 Homo Sapiens , Saccharomyces Cerevisiae MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-06-29
Deposition Author(s): Chrustowicz, J. , Prabu, R.J. , Schulman, B.A. , Sherpa, D.