8PFE
Crystal structure of an hexavariant of the b1 domain of human neuropilin-1 in complex with the kdkppr peptide
PDB DOI: 10.2210/pdb8pfe/pdb
Classification: PROTEIN BINDING Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2023-06-15 Deposition Author(s): Didierjean, C. , Favier, F. , Jelsch, C.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.35 Å
Crystal structure of an hexavariant of the b1 domain of human neuropilin-1 in complex with the kdkppr peptide
Didierjean, C. , Favier, F. , Jelsch, C.
Primary Citation of Related Structures: 8PFE
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Neuropilin-1 | A | 180 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MGSSHHHHHHGSGSGLEVLFQGPHMFKCMKALGMESGKIHSKQITASSQYSTNWSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSNGKDWITIEEGNKPVLFQGNTNPTDVVVAVFPEPLITRFVRIKPATWETGISMRFEVYGCKIT |
| Neuropilin-1 | C | 180 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MGSSHHHHHHGSGSGLEVLFQGPHMFKCMKALGMESGKIHSKQITASSQYSTNWSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSNGKDWITIEEGNKPVLFQGNTNPTDVVVAVFPEPLITRFVRIKPATWETGISMRFEVYGCKIT |
| LYS-ASP-LYS-PRO-PRO-ARG | B | 6 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | KDKPPR |
| LYS-ASP-LYS-PRO-PRO-ARG | D | 6 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | KDKPPR |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2023-06-15 Deposition Author(s): Didierjean, C. , Favier, F. , Jelsch, C.