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8OK9

Heterodimeric complex of archaeoglobus fulgidus argonaute protein af1318 (afago) with dna and afago-n protein containing n-l1-l2 domains

PDB DOI: 10.2210/pdb8ok9/pdb

Classification: RNA BINDING PROTEIN
Organism(s): Datura Metel , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2023-03-27
Deposition Author(s): Manakova, E.N. , Zaremba, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.5 Å

8ok9
Literature

Heterodimeric complex of archaeoglobus fulgidus argonaute protein af1318 (afago) with dna and afago-n protein containing n-l1-l2 domains

Manakova, E.N. , Zaremba, M.

Primary Citation of Related Structures: 8OK9


Proteins
Molecule Chains Sequence Length Organism Sequence
Piwi protein AF_1318 A 441 Datura Metel , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGSSHHHHHHSQDPMMEYKIVENGLTYRIGNGASVPISNTGELIKGLRNYGPYEVPSLKYNQIALIHNNQFSSLINQLKSQISSKIDEVWHIHNINISEFIYDSPHFDSIKSQVDNAIDTGVDGIMLVLPEYNTPLYYKLKSYLINSIPSQFMRYDILSNRNLTFYVDNLLVQFVSKLGGKPWILNVDPEKGSDIIIGTGATRIDNVNLFCFAMVFKKDGTMLWNEISPIVTSSEYLTYLKSTIKKVVYGFKKSNPDWDVEKLTLHVSGKRPKMKDGETKILKETVEELKKQEMVSRDVKYAILHLNETHPFWVMGDPNNRFHPYEGTKVKLSSKRYLLTLLQPYLKRNGLEMVTPIKPLSVEIVSDNWTSEEYYHNVHEILDEIYYLSKMNWRGFRSRNLPVTVNYPKLVAGIIANVNRYGGYPINPEGNRSLQTNPWFL
Archaeoglobus fulgidus AfAgo-N protein C 264 Datura Metel , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGSSHHHHHHSQDPMEIPLSSGNVNTPDVRSSGILYINIYPIVNYPETIKVSAIPYYEEFLPGKWKKRIGDLIYLYGYGIENEFDEIDNSNALFGKIFRKYLLDILSENIATPWQLKELGSTLRLVKEITENYEFSNIIKLQYELIINVHHWQNTNFGIIVDLKINILDRENNQRISYTKIKDKYGESVKKKIWVSVQAFHRHLTPEGKKYATAMRDKFNLLTGLLKEAFGSSEDEKTFSTPDGEIKIVFKPLEIVEVSNNDGI

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*AP*TP*CP*GP*AP*CP*CP*AP*GP*GP*CP*TP*AP*CP*G)-3') r 15 NA ATCGACCAGGCTACG
DNA (5'-D(P*AP*TP*CP*GP*AP*CP*CP*AP*GP*GP*CP*TP*AP*CP*G)-3') s 15 NA ATCGACCAGGCTACG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-03-27
Deposition Author(s): Manakova, E.N. , Zaremba, M.