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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8OFF

Structure of bard1 ard-brcts in complex with h2akc15ub nucleosomes (map1)

PDB DOI: 10.2210/pdb8off/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Felis Catus , Homo Sapiens

Deposited: 2023-03-15
Deposition Author(s): Burdett, H. , Foglizzo, M. , Wilson, M.D. , Zeqiraj, E.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.4 Å

8off
Literature

Structure of bard1 ard-brcts in complex with h2akc15ub nucleosomes (map1)

Burdett, H. , Foglizzo, M. , Wilson, M.D. , Zeqiraj, E.

Primary Citation of Related Structures: 8OFF


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (142-MER) j 350 NA AATACGCGGCCGCCCTGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCGCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCCTGTGCAATGTGTTCCATATGGAACACATTGCACAGGATGTATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGCGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTCCAGGGCGGCCGCGTATT
DNA (142-MER) i 350 NA AATACGCGGCCGCCCTGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCGCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCCTGTGCAATGTGTTCCATATGGAACACATTGCACAGGATGTATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGCGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTCCAGGGCGGCCGCGTATT

Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3.1 CA 135 Felis Catus , Homo Sapiens MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER
Histone H3.1 CB 135 Felis Catus , Homo Sapiens MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER
Histone H2B type 1-C/E/F/G/I BA 126 Felis Catus , Homo Sapiens MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK
Histone H2B type 1-C/E/F/G/I BB 126 Felis Catus , Homo Sapiens MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK
Histone H2A type 1 AA 130 Felis Catus , Homo Sapiens MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Histone H2A type 1 AB 130 Felis Catus , Homo Sapiens MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Histone H4 DA 103 Felis Catus , Homo Sapiens MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H4 DB 103 Felis Catus , Homo Sapiens MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
BRCA1 associated RING domain 1 EA 773 Felis Catus , Homo Sapiens MPGNRQLRVRSGNEPRPAPAMEPEGRGAWAHSRAAFDRLEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDNKLSDLKEDTSRQNVFNDAENKKNSIKMWFSPRSKKVRYVVTKVSVQTQPQVIDDGNAQQASVYKFVSTSPPTSVPERAKKASTRSRKKQKKKTLAEINQEWNFEAEKEDGEPDSKEEFKEKLVSFCSQPSVIASPQTNGGIDLLASDSVTESECSRSLTEVSLPLAEQIESPETGSRNEDATPEKNACVDHLTSKQPLPSGHNGRPGRRSRRSSPVSKRCRSSIPGTSGQQMLLSENKPLPGCSSPPPSKRKVGDTLRRKNSNISDESMSLSPGTPPSTLNSPSYRRMMFSPSAVKLSPGSLTAVKRNHRGETLLHIASIKGDLPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNSTGYQNDSPLHDAAKNGHMDIVKLLLSYGASRNAVNIFGLRPVDYADGENMKSLLLLPEQNESSSTRHCSVTNTGQRRDGPLVLIGSGLSSEQQKMLSELAVILKAKKCAEFDSTVTHVIVPGDTVQSTLKCMLGILNGCWILKFEWVKACLQRKACEQEEKYEIPEGPQRSRLNKEQLLPKLFDGCYFYFGGAFKHHPKDNLVKLVTAAGGQVLSRKPKPDSDVTQTINTVAYHAKADSDQRFCTQYIIYEDLSNHRPERVRQGKVWMAPSSWFIDCVMSFELLPLDS
BRCA1 associated RING domain 1 EB 773 Felis Catus , Homo Sapiens MPGNRQLRVRSGNEPRPAPAMEPEGRGAWAHSRAAFDRLEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDNKLSDLKEDTSRQNVFNDAENKKNSIKMWFSPRSKKVRYVVTKVSVQTQPQVIDDGNAQQASVYKFVSTSPPTSVPERAKKASTRSRKKQKKKTLAEINQEWNFEAEKEDGEPDSKEEFKEKLVSFCSQPSVIASPQTNGGIDLLASDSVTESECSRSLTEVSLPLAEQIESPETGSRNEDATPEKNACVDHLTSKQPLPSGHNGRPGRRSRRSSPVSKRCRSSIPGTSGQQMLLSENKPLPGCSSPPPSKRKVGDTLRRKNSNISDESMSLSPGTPPSTLNSPSYRRMMFSPSAVKLSPGSLTAVKRNHRGETLLHIASIKGDLPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNSTGYQNDSPLHDAAKNGHMDIVKLLLSYGASRNAVNIFGLRPVDYADGENMKSLLLLPEQNESSSTRHCSVTNTGQRRDGPLVLIGSGLSSEQQKMLSELAVILKAKKCAEFDSTVTHVIVPGDTVQSTLKCMLGILNGCWILKFEWVKACLQRKACEQEEKYEIPEGPQRSRLNKEQLLPKLFDGCYFYFGGAFKHHPKDNLVKLVTAAGGQVLSRKPKPDSDVTQTINTVAYHAKADSDQRFCTQYIIYEDLSNHRPERVRQGKVWMAPSSWFIDCVMSFELLPLDS
Ubiquitin FA 76 Felis Catus , Homo Sapiens MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-03-15
Deposition Author(s): Burdett, H. , Foglizzo, M. , Wilson, M.D. , Zeqiraj, E.