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8JL0

Cryo-em structure of the prokaryotic sparsa system complex

PDB DOI: 10.2210/pdb8jl0/pdb

Classification: ANTIVIRAL PROTEIN/DNA/RNA
Organism(s): Geobacter Sulfurreducens , Synthetic Construct

Deposited: 2023-06-02
Deposition Author(s): Long, F. , Xu, X. , Zhen, X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.1 Å

8jl0
Literature

Cryo-em structure of the prokaryotic sparsa system complex

Long, F. , Xu, X. , Zhen, X.

Primary Citation of Related Structures: 8JL0


Proteins
Molecule Chains Sequence Length Organism Sequence
Sir2 superfamily protein A 586 Geobacter Sulfurreducens , Synthetic Construct MDVLTDNEFYQHYLQNSQHMMWFLGAGTSRSAGLPTASDIIWDLKHRYYCLHENQDYQKHDINNHAIKSKIQSYMDSKGFPLQWSPEEYSFYFELVFRDDYEAQRKYLLEALASRKVSLNIGHRVLAALLEMNQTKVVFTTNFDDVIETAFSDISGKHLSVYHLEGSYAALSALNTEAFPIYAKIHGDFRYQKIKNLTPDLQTNDREIHKCFLAAAIRFGLVVSGYSGRDENVMTMLRAAIDQNNAFPHGLYWTVPSISKSEPAVQDLITYAQGKGVRAYLVETGTFDEMLSKIWRQVKDKPAAIDAKVRTARVCPVSIPLPGPGKSFPALRTNALPVVTQSIRCGVVTLASPITFSELKERISQKSPKALLTYTEKVLFLGGEPEIRKIFSNDEINSIGQYYIDEIAQSVAASTFLKSFVEEAILTALLREKPILHRVRHRTHYAVIPNASAKDDRFLDLRKAVGFKGDLGYITGNVTNAKELSWAEAVSIRLEERGGKLWIMLKPEIWIKPLDRREEATDFIRSRRRYRFNQCSYQILDAWIKILFGSIGGGGTVNISCFPDAEFKAEFEIGTRTAFSLGVGYG
Piwi domain protein B 473 Geobacter Sulfurreducens , Synthetic Construct MADNLSQLAAHSTIPEPLLLFKDNRTDTHPLRGLSQYGPYSACFNLPGQVRLAYLAPTEHMRKLDAIVRELQNPATPKEATNYYVEYGGFEKVFKVPLVMPQEHLRCLALDECHGVAANGNGLALADKIVQSMSGLFRQKHAFDVLLVYLPASWKKCFEYDGFDLHDRIKAKVAPLNLPIQIINDTALTRQCRANVMWGVSVALYAKAGGIPWKLADWDKDEAYIGLSYAIKKNAEGQEYTTCCSQVFDPDGTGFEFVAYDTREFITDRKGNPYLSYQEMQSVLSKSLHLYQSSHNGRMPRKIFIHKTTHFTEDEIQGAFDSFSSSTEIELVQIIQSTNWYGLKVDGKKGDKPVAPASYPVDRGLYQPLTESECLLWTQGSVMGVNQQNPGQPVFKEAALTPLPNPIMLRRFSGNGGWHATCSSILALTKVDWNNNTLYKKLPVTLVYSQVFADVVKQTPEIVNEIYDYRFFM

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*AP*CP*GP*AP*CP*GP*TP*CP*TP*AP*AP*GP*AP*AP*AP*CP*CP*AP*TP*TP*AP*T)-3') d 22 NA ACGACGTCTAAGAAACCATTAT
RNA (5'-R(P*AP*UP*AP*AP*UP*GP*GP*UP*UP*UP*CP*UP*UP*AP*GP*AP*CP*GP*UP*CP*GP*U)-3') c 22 NA AUAAUGGUUUCUUAGACGUCGU
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2023-06-02
Deposition Author(s): Long, F. , Xu, X. , Zhen, X.