PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

8J5B

Crystal structure of p domain from norovirus gi.4 capsid protein.

PDB DOI: 10.2210/pdb8j5b/pdb

Classification: VIRAL PROTEIN
Organism(s): Norovirus Hu/Gi.4/S50/2008/Lilla Edet/Sweden

Deposited: 2023-04-21
Deposition Author(s): Hasegawa, K. , Katsura, K. , Kimura-Someya, T. , Sakai, N. , Shirouzu, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.89 Å

8j5b
Literature

Crystal structure of p domain from norovirus gi.4 capsid protein.

Hasegawa, K. , Katsura, K. , Kimura-Someya, T. , Sakai, N. , Shirouzu, M.

Primary Citation of Related Structures: 8J5B


Proteins
Molecule Chains Sequence Length Organism Sequence
Capsid protein A 314 Norovirus Hu/Gi.4/S50/2008/Lilla Edet/Sweden QKTRPFTVPNIPLKYLSNSRIPNPIEGMSLSPDQTQNVQFQNGRCTIDGQPLGTTPVSVSQLCKFRGRITSGQRVLNLTELDGSPFMAFAAPAPAGFPDLGSCDWHIEMSKIPNSSTQNNPIVTNSVKPNSQQFVPHLSSITLDENVSSGGDYIGTIQWTSPPSDSGGANTNFWKIPDYGSSLAEASQLAPAVYPPGFNEVIVYFMASIPGPNQSGSPNLVPCLLPQEYITHFISEQAPIQGEAALLHYVDPDTNRNLGEFKLYPGGYLTCVPNSSSTGPQQLPLDGVFVFASWVSRFYQLKPVGTAGPARGRL
Capsid protein B 303 Norovirus Hu/Gi.4/S50/2008/Lilla Edet/Sweden TRPFTVPNIPLKYLSNSRIPNPIEGMSLSPDQTQNVQFQNGRCTIDGQPLGTTPVSVSQLCKFRGRITSGQRVLNLTELDGSPFMAFAAPAPAGFPDLGSCDWHIEMSKIPNSSTQNNPIVTNSVKPNSQQFVPHLSSITLDENVSSGGDYIGTIQWTSPPSDSGGANTNFWKIPDYGSSLAEASQLAPAVYPPGFNEVIVYFMASIPGPNQSGSPNLVPCLLPQEYITHFISEQAPIQGEAALLHYVDPDTNRNLGEFKLYPGGYLTCVPNSSSTGPQQLPLDGVFVFASWVSRFYQLKPVG
Capsid protein C 303 Norovirus Hu/Gi.4/S50/2008/Lilla Edet/Sweden TRPFTVPNIPLKYLSNSRIPNPIEGMSLSPDQTQNVQFQNGRCTIDGQPLGTTPVSVSQLCKFRGRITSGQRVLNLTELDGSPFMAFAAPAPAGFPDLGSCDWHIEMSKIPNSSTQNNPIVTNSVKPNSQQFVPHLSSITLDENVSSGGDYIGTIQWTSPPSDSGGANTNFWKIPDYGSSLAEASQLAPAVYPPGFNEVIVYFMASIPGPNQSGSPNLVPCLLPQEYITHFISEQAPIQGEAALLHYVDPDTNRNLGEFKLYPGGYLTCVPNSSSTGPQQLPLDGVFVFASWVSRFYQLKPVG
Capsid protein D 308 Norovirus Hu/Gi.4/S50/2008/Lilla Edet/Sweden TRPFTVPNIPLKYLSNSRIPNPIEGMSLSPDQTQNVQFQNGRCTIDGQPLGTTPVSVSQLCKFRGRITSGQRVLNLTELDGSPFMAFAAPAPAGFPDLGSCDWHIEMSKIPNSSTQNNPIVTNSVKPNSQQFVPHLSSITLDENVSSGGDYIGTIQWTSPPSDSGGANTNFWKIPDYGSSLAEASQLAPAVYPPGFNEVIVYFMASIPGPNQSGSPNLVPCLLPQEYITHFISEQAPIQGEAALLHYVDPDTNRNLGEFKLYPGGYLTCVPNSSSTGPQQLPLDGVFVFASWVSRFYQLKPVGTAGPA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2023-04-21
Deposition Author(s): Hasegawa, K. , Katsura, K. , Kimura-Someya, T. , Sakai, N. , Shirouzu, M.