Crystal structure of n-methyl-cis-4-hydroxy-d-proline dehydratase in clostridium sp. fs41
PDB DOI: 10.2210/pdb8iof/pdb
Classification: LYASE Organism(s): Clostridium Sp. Fs41
Deposited: 2023-03-11 Deposition Author(s): Jiang, L. , Zhang, Y.
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Benzylsuccinate synthase alpha subunit | A | 793 | Clostridium Sp. Fs41 | MSKDYMKRIQALRENYMSRRVEMDILDAYYVTQGFKATEGQPWQIQKAVAMKTVYENKPIFIQDHELLVGGVAFKPRAGILNPDSACSVIEKELDTISTRKYDPFYLSEENKKLFMEEVAPYWRGKCVLDRWNAMMPEDVRTMRDGGMLYVDKKFVRGYGENTPGWRTLLAKGITGIKKEAEEKLAALDDAHGEDVLKQIIFYKSLIISAEGIIALANRHADLAEKMAEKEADEKRRAELLKIAEVNRNVPANPPRNFYEALQSMLTYEFCIFMEQNASSYNLGRMDQYLIQYYEKDLADGTMTQDEAQELMDCFWIKISEMGLFQDGESAAFSAGYNMTVQVCAGGIDQYGNDAVNDLSYMTIQATQDTALKEPNMTVRYSISKNPDSFLRKAAECIRMGRTMPAVYHDDAGIKMLLNKGIPMSQAWDWTPCGCVETNLEGRLKSYTDIGEISMGGVVDMVMNNGRSRKTGEQISIRTGDPRDFKTFDDFMAAVKKQIDHFVHTMATMNSYLDYLSENYRPVPALSLTYPNCMAVGKDYANGGAEFNVGNGINIIGQADIINSVADIKYLVFDEKKISMDELCRALDADFEGYEHIHKMCMDAPKYGNDDPKADFCVGEIYNYLVDQIEQYDSPFGKLTAGMLPVSGNVPIGQSVGALPSGRKAWTPLADGIGATGGTDINGATALLKSISNLPHARFTQGTQMNLKIDPKLLEGERGLNSMMVLLKTQCTLDIYHTQYNVINPEILMDAQKNPGDHKDLLVRVAGYTAFFVELGKDIQDDIIQRTEIENWG |
| Benzylsuccinate synthase alpha subunit | B | 793 | Clostridium Sp. Fs41 | MSKDYMKRIQALRENYMSRRVEMDILDAYYVTQGFKATEGQPWQIQKAVAMKTVYENKPIFIQDHELLVGGVAFKPRAGILNPDSACSVIEKELDTISTRKYDPFYLSEENKKLFMEEVAPYWRGKCVLDRWNAMMPEDVRTMRDGGMLYVDKKFVRGYGENTPGWRTLLAKGITGIKKEAEEKLAALDDAHGEDVLKQIIFYKSLIISAEGIIALANRHADLAEKMAEKEADEKRRAELLKIAEVNRNVPANPPRNFYEALQSMLTYEFCIFMEQNASSYNLGRMDQYLIQYYEKDLADGTMTQDEAQELMDCFWIKISEMGLFQDGESAAFSAGYNMTVQVCAGGIDQYGNDAVNDLSYMTIQATQDTALKEPNMTVRYSISKNPDSFLRKAAECIRMGRTMPAVYHDDAGIKMLLNKGIPMSQAWDWTPCGCVETNLEGRLKSYTDIGEISMGGVVDMVMNNGRSRKTGEQISIRTGDPRDFKTFDDFMAAVKKQIDHFVHTMATMNSYLDYLSENYRPVPALSLTYPNCMAVGKDYANGGAEFNVGNGINIIGQADIINSVADIKYLVFDEKKISMDELCRALDADFEGYEHIHKMCMDAPKYGNDDPKADFCVGEIYNYLVDQIEQYDSPFGKLTAGMLPVSGNVPIGQSVGALPSGRKAWTPLADGIGATGGTDINGATALLKSISNLPHARFTQGTQMNLKIDPKLLEGERGLNSMMVLLKTQCTLDIYHTQYNVINPEILMDAQKNPGDHKDLLVRVAGYTAFFVELGKDIQDDIIQRTEIENWG |
| Benzylsuccinate synthase alpha subunit | C | 793 | Clostridium Sp. Fs41 | MSKDYMKRIQALRENYMSRRVEMDILDAYYVTQGFKATEGQPWQIQKAVAMKTVYENKPIFIQDHELLVGGVAFKPRAGILNPDSACSVIEKELDTISTRKYDPFYLSEENKKLFMEEVAPYWRGKCVLDRWNAMMPEDVRTMRDGGMLYVDKKFVRGYGENTPGWRTLLAKGITGIKKEAEEKLAALDDAHGEDVLKQIIFYKSLIISAEGIIALANRHADLAEKMAEKEADEKRRAELLKIAEVNRNVPANPPRNFYEALQSMLTYEFCIFMEQNASSYNLGRMDQYLIQYYEKDLADGTMTQDEAQELMDCFWIKISEMGLFQDGESAAFSAGYNMTVQVCAGGIDQYGNDAVNDLSYMTIQATQDTALKEPNMTVRYSISKNPDSFLRKAAECIRMGRTMPAVYHDDAGIKMLLNKGIPMSQAWDWTPCGCVETNLEGRLKSYTDIGEISMGGVVDMVMNNGRSRKTGEQISIRTGDPRDFKTFDDFMAAVKKQIDHFVHTMATMNSYLDYLSENYRPVPALSLTYPNCMAVGKDYANGGAEFNVGNGINIIGQADIINSVADIKYLVFDEKKISMDELCRALDADFEGYEHIHKMCMDAPKYGNDDPKADFCVGEIYNYLVDQIEQYDSPFGKLTAGMLPVSGNVPIGQSVGALPSGRKAWTPLADGIGATGGTDINGATALLKSISNLPHARFTQGTQMNLKIDPKLLEGERGLNSMMVLLKTQCTLDIYHTQYNVINPEILMDAQKNPGDHKDLLVRVAGYTAFFVELGKDIQDDIIQRTEIENWG |
| Benzylsuccinate synthase alpha subunit | D | 793 | Clostridium Sp. Fs41 | MSKDYMKRIQALRENYMSRRVEMDILDAYYVTQGFKATEGQPWQIQKAVAMKTVYENKPIFIQDHELLVGGVAFKPRAGILNPDSACSVIEKELDTISTRKYDPFYLSEENKKLFMEEVAPYWRGKCVLDRWNAMMPEDVRTMRDGGMLYVDKKFVRGYGENTPGWRTLLAKGITGIKKEAEEKLAALDDAHGEDVLKQIIFYKSLIISAEGIIALANRHADLAEKMAEKEADEKRRAELLKIAEVNRNVPANPPRNFYEALQSMLTYEFCIFMEQNASSYNLGRMDQYLIQYYEKDLADGTMTQDEAQELMDCFWIKISEMGLFQDGESAAFSAGYNMTVQVCAGGIDQYGNDAVNDLSYMTIQATQDTALKEPNMTVRYSISKNPDSFLRKAAECIRMGRTMPAVYHDDAGIKMLLNKGIPMSQAWDWTPCGCVETNLEGRLKSYTDIGEISMGGVVDMVMNNGRSRKTGEQISIRTGDPRDFKTFDDFMAAVKKQIDHFVHTMATMNSYLDYLSENYRPVPALSLTYPNCMAVGKDYANGGAEFNVGNGINIIGQADIINSVADIKYLVFDEKKISMDELCRALDADFEGYEHIHKMCMDAPKYGNDDPKADFCVGEIYNYLVDQIEQYDSPFGKLTAGMLPVSGNVPIGQSVGALPSGRKAWTPLADGIGATGGTDINGATALLKSISNLPHARFTQGTQMNLKIDPKLLEGERGLNSMMVLLKTQCTLDIYHTQYNVINPEILMDAQKNPGDHKDLLVRVAGYTAFFVELGKDIQDDIIQRTEIENWG |
Method: X-RAY DIFFRACTION